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Reference Related Resource Count : 31,512 |
Associated Resources List |
27 items |
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Strain List | 20 items | Page: 1 / 1 1 | 1 - 20 / 20 |
Medaka: | Paltan | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Paltan, Hwaseong, Gyeonggi |
Notes : | China-West Korean Population |
Special Affairs : | 中国西韓集団 |
Taxonomy : | Oryzias |
Reference : | Koga A, Sasaki S, Naruse K, Shimada A, Sakaizumi M. (2011) Occurrence of a short variant of the Tol2 transposable element in natural populations of the medaka fish. Genet Res (Camb) 93(1) 13-21 |
Medaka: | Yokote | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Yokote, Akita Pref. |
Notes : | North Japan Population |
Strain ID : | WS1593 |
Taxonomy : | Oryzias |
Reference : | Koga A, Sasaki S, Naruse K, Shimada A, Sakaizumi M. (2011) Occurrence of a short variant of the Tol2 transposable element in natural populations of the medaka fish. Genet Res (Camb) 93(1) 13-21 |
Medaka: | Sakura | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Sakura, Chiba Pref. |
Notes : | South Japan Population |
Strain ID : | WS1609 |
Taxonomy : | Oryzias |
Reference : | Shimada A, Fukamachi S, Wakamatsu Y, Ozato K, Shima A. (2002) Induction and characterization of mutations at the b locus of the medaka, Oryzias latipes. Zoolog Sci 19(4) 411-7 |
Medaka: | Nago | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Nago, Okinawa Pref. |
Notes : | South Japan Population |
Strain ID : | WS1637 |
Taxonomy : | Oryzias |
Reference : | Kasahara M, Naruse K, Sasaki S, Nakatani Y, Qu W, Ahsan B, Yamada T, Nagayasu Y, Doi K, Kasai Y, Jindo T, Kobayashi D, Shimada A, Toyoda A, Kuroki Y, Fujiyama A, Sasaki T, Shimizu A, Asakawa S, Shimizu N, Hashimoto S, Yang J, Lee Y, Matsushima K, Sugano S, Sakaizumi M, Narita T, Ohishi K, Haga S, Ohta F, Nomoto H, Nogata K, Morishita T, Endo T, Shin-I T, Takeda H, Morishita S, Kohara Y. (2007) The medaka draft genome and insights into vertebrate genome evolution. Nature 447(7145) 714-9 |
Medaka: | Kobe | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Kobe, Hyogo Pref. |
Notes : | South Japan Population |
Strain ID : | WS1640 |
Taxonomy : | Oryzias |
Reference : | Koga A, Sasaki S, Naruse K, Shimada A, Sakaizumi M. (2011) Occurrence of a short variant of the Tol2 transposable element in natural populations of the medaka fish. Genet Res (Camb) 93(1) 13-21 |
Medaka: | Kasumi | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Kasumi, Hyogo Pref. |
Notes : | South Japan Population |
Strain ID : | WS1654 |
Taxonomy : | Oryzias |
Reference : | Koga A, Sasaki S, Naruse K, Shimada A, Sakaizumi M. (2011) Occurrence of a short variant of the Tol2 transposable element in natural populations of the medaka fish. Genet Res (Camb) 93(1) 13-21 |
Medaka: | Shanghai | Available | Utsunomiya University |
Category: Wild populations
Class : | Wild populations |
Characteristics : | Qingpu, Shanghai, China |
Notes : | China-West Korean Population |
Strain ID : | WS1665 |
Taxonomy : | Oryzias |
Reference : | Koga A, Sasaki S, Naruse K, Shimada A, Sakaizumi M. (2011) Occurrence of a short variant of the Tol2 transposable element in natural populations of the medaka fish. Genet Res (Camb) 93(1) 13-21 |
Medaka: | Kaga | National Institute for Basic Biology |
Category: Inbred strains
Class : | Inbred strains |
Characteristics : | This strain belongs to the Northern Japanese Population, and derived from the wild population in Kaga city, Ishikawa prefecture, Japan (K-Kaga (WS339)). |
Strain ID : | IB833 |
Taxonomy : | Oryzias |
Reference : | Ito K, Morioka M, Kimura S, Tasaki M, Inohaya K, Kudo A. (2014) Differential reparative phenotypes between zebrafish and medaka after cardiac injury. Dev Dyn 243(9) 1106-15 Martinez-Morales JR, Rembold M, Greger K, Simpson JC, Brown KE, Quiring R, Pepperkok R, Martin-Bermudo MD, Himmelbauer H, Wittbrodt J. (2009) ojoplano-mediated basal constriction is essential for optic cup morphogenesis. Development 136(13) 2165-75 |
Medaka: | ci | Available | National Institute for Basic Biology |
Category: Mutatnts
Class : | Spontaneous mutant strains |
Characteristics : | Fewer xanthophores than in the wild type. More well developed leucophores than the wild type. |
Notes : | The RECIPIENT shall use the BIOLOGICAL MATERIALS only for the purpose of research. |
Strain ID : | MT15 |
Taxonomy : | Oryzias |
Reference : | Takeda H, Shimada A. (2010) The art of medaka genetics and genomics: what makes them so unique? Annu Rev Genet 44 217-41 |
Medaka: | dg | Available | National Institute for Basic Biology |
Category: Mutatnts
Class : | Spontaneous mutant strains |
Characteristics : | Guanine deposition in iridophores is low. |
Notes : | The RECIPIENT shall use the BIOLOGICAL MATERIALS only for the purpose of research. |
Strain ID : | MT30 |
Taxonomy : | Oryzias |
Reference : | Kelsh RN, Inoue C, Momoi A, Kondoh H, Furutani-Seiki M, Ozato K, Wakamatsu Y. (2004) The Tomita collection of medaka pigmentation mutants as a resource for understanding neural crest cell development. Mech Dev 121(7-8) 841-59 |
Medaka: | dm | Available | National Institute for Basic Biology |
Category: Mutatnts
Class : | Spontaneous mutant strains |
Characteristics : | Pigment granules in melanophores and leucophores are always dispersed. |
Notes : | The RECIPIENT shall use the BIOLOGICAL MATERIALS only for the purpose of research. |
Strain ID : | MT35 |
Taxonomy : | Oryzias |
Reference : | Kelsh RN, Inoue C, Momoi A, Kondoh H, Furutani-Seiki M, Ozato K, Wakamatsu Y. (2004) The Tomita collection of medaka pigmentation mutants as a resource for understanding neural crest cell development. Mech Dev 121(7-8) 841-59 |
Medaka: | Hd-rR.Y^wSrn | Available | Utsunomiya University |
Category: Mutatnts
Class : | Mutants of sex determination and differentiation |
Characteristics : | Loss-of -function mutant of DMY gene from Shirone, with Hd-rR background |
Strain ID : | MT201 |
Taxonomy : | Oryzias |
Reference : | Otake H, Shinomiya A, Matsuda M, Hamaguchi S, Sakaizumi M. (2006) Wild-derived XY sex-reversal mutants in the Medaka, Oryzias latipes. Genetics 173(4) 2083-90 |
Medaka: | Y^wKrb Y^Hd-rR.rr | Available | Utsunomiya University |
Category: Mutatnts
Class : | Mutants of sex determination and differentiation |
Characteristics : | Loss-of -function mutant of DMY gene from Kurobe |
Strain ID : | MT203 |
Taxonomy : | Oryzias |
Reference : | Otake H, Shinomiya A, Matsuda M, Hamaguchi S, Sakaizumi M. (2006) Wild-derived XY sex-reversal mutants in the Medaka, Oryzias latipes. Genetics 173(4) 2083-90 |
Medaka: | Y^wOur Y^HNI | Available | Utsunomiya University |
Category: Mutatnts
Class : | Mutants of sex determination and differentiation |
Characteristics : | Loss-of -function mutant of DMY gene from Oura |
Strain ID : | MT206 |
Taxonomy : | Oryzias |
Reference : | Otake H, Shinomiya A, Matsuda M, Hamaguchi S, Sakaizumi M. (2006) Wild-derived XY sex-reversal mutants in the Medaka, Oryzias latipes. Genetics 173(4) 2083-90 |
Medaka: | OK-Cab | Available | National Institute for Basic Biology |
Category: Mutatnts
Class : | Spontaneous mutant strains |
Characteristics : | Standard line (Southern line), wild type |
Strain ID : | MT830 |
Taxonomy : | Oryzias |
Reference : | Shimizu Y, Kawasaki T. (2021) Differential Regenerative Capacity of the Optic Tectum of Adult Medaka and Zebrafish. Front Cell Dev Biol 9 686755 Shimizu T, Fujita N, Tsuji-Tamura K, Kitagawa Y, Fujisawa T, Tamura M, Sato M. (2021) Osteocytes as main responders to low-intensity pulsed ultrasound treatment during fracture healing. Sci Rep 11(1) 10298 |
Medaka: | tab | Available | National Institute for Basic Biology |
Category: Mutatnts
Symbol : | tacobo |
Class : | Mutants of skeleton, blood vessel and heart |
Characteristics : | Defective neurogenesis. Shortend body axis, Small eyes. Mutated gene is laminin gamma1. |
Special Affairs : | ■ The RECIPIENT shall refer the following publication in any PUBLICATIONS. (Name of the Publication: Tsuda S et al. (2010) FAK-mediated extracellular signals are essential for interkinetic nuclear migration and planar divisions in the neuroepithelium. J Cell Sci. 123(Pt 3):484-96.) |
Strain ID : | MT166 |
Taxonomy : | Oryzias |
Reference : | Sharanya Maanasi Kalasekar, Eleni Zacharia, Noah Kessler, Nicole A. Ducharme, Jan-Åke Gustafsson, Ioannis A. Kakadiaris, Maria Bondesson (2015) Identification of environmental chemicals that induce yolk malabsorption in zebrafish using automated image segmentation Reproductive Toxicology 55 20-29 |
Medaka: | 2008 | Available | National Institute for Basic Biology |
Category: TILLING
Medaka: | 2025 | Available | National Institute for Basic Biology |
Category: TILLING
Medaka: | 2028 | Available | National Institute for Basic Biology |
Category: TILLING
Medaka: | 4391 | Available | National Institute for Basic Biology |
Category: TILLING
DNA List | 7 items | Page: 1 / 1 1 | 1 - 7 / 7 |
Medaka: | olec36d21 | Available | National Institute for Basic Biology |
Category: olec
Tissue : | Fry library |
Direction : | 5 |
Definition : | unnamed protein product [Tetraodon nigroviridis] |
Accession Number : | DK147630 |
Taxonomy : | Oryzias latipes |
Reference : | Kikuta A, Furukawa E, Ogawa R, Suganuma N, Saitoh M, Nishimaki T, Katsumura T, Oota H, Kawamoto T, Tatsukawa H, Hashimoto H, Hitomi K. (2015) Biochemical Characterization of Medaka (Oryzias latipes) Transglutaminases, OlTGK1 and OlTGK2, as Orthologues of Human Keratinocyte-Type Transglutaminase. PLoS One 10(12) e0144194 |
Medaka: | olte61d07 | National Institute for Basic Biology |
Category: olte
Tissue : | Testis library |
Direction : | 5 |
Definition : | F-box protein 47 [Mus musculus] |
Accession Number : | FS529160 |
Taxonomy : | Oryzias latipes |
Reference : | Kikuchi M, Nishimura T, Ishishita S, Matsuda Y, Tanaka M. (2020) <i>foxl3</i>, a sexual switch in germ cells, initiates two independent molecular pathways for commitment to oogenesis in medaka. Proc Natl Acad Sci U S A 117(22) 12174-12181 |
Medaka: | olsp62a16 | National Institute for Basic Biology |
Category: olsp
Tissue : | Spleen library |
Direction : | 5 |
Definition : | unnamed protein product [Tetraodon nigroviridis] |
Taxonomy : | Oryzias latipes |
Reference : | Kikuta A, Furukawa E, Ogawa R, Suganuma N, Saitoh M, Nishimaki T, Katsumura T, Oota H, Kawamoto T, Tatsukawa H, Hashimoto H, Hitomi K. (2015) Biochemical Characterization of Medaka (Oryzias latipes) Transglutaminases, OlTGK1 and OlTGK2, as Orthologues of Human Keratinocyte-Type Transglutaminase. PLoS One 10(12) e0144194 |
Medaka: | olecno3_i19 | National Institute for Basic Biology |
Category: Non redundant full length cDNA
Tissue : | Non redundant full length cDNA |
Definition : | rod opsin [Oryzias latipes] |
Taxonomy : | Oryzias |
Reference : | Mizutani K, Yoshioka S, Mizutani Y, Iwata S, Mikami B. (2011) High-throughput construction of expression system using yeast Pichia pastoris, and its application to membrane proteins. Protein Expr Purif 77(1) 1-8 |
Medaka: | olebno16_g13 | National Institute for Basic Biology |
Category: Non redundant full length cDNA
Tissue : | Non redundant full length cDNA |
Definition : | M/LWS type opsin LWS-A [Oryzias latipes] |
Taxonomy : | Oryzias |
Reference : | Mizutani K, Yoshioka S, Mizutani Y, Iwata S, Mikami B. (2011) High-throughput construction of expression system using yeast Pichia pastoris, and its application to membrane proteins. Protein Expr Purif 77(1) 1-8 |
Medaka: | olbrno9_f15 | National Institute for Basic Biology |
Category: Non redundant full length cDNA
Tissue : | Non redundant full length cDNA |
Definition : | glyceraldehyde 3-phosphate dehydrogenase isoform 2 [Oplegnathus fasciatus] |
Taxonomy : | Oryzias |
Reference : | Yamashita J, Kawabata Y, Okubo K. (2017) Expression of isotocin is male-specifically up-regulated by gonadal androgen in the medaka brain. J Neuroendocrinol 29(12) |
Medaka: | OHB1 | Available | National Institute for Basic Biology |
Category: Related species BAC clone
Antibiotics resistance : | Ampicillin (Amp) |
Source : | Genomic DNA |
Strain : | Oryzias hubbsi (ZZ individual) |
Vector : | pKS145,SacI site |
Taxonomy : | Oryzias hubbsi |
Reference : | Inoue Y, Saga T, Aikawa T, Kumagai M, Shimada A, Kawaguchi Y, Naruse K, Morishita S, Koga A, Takeda H. (2017) Complete fusion of a transposon and herpesvirus created the Teratorn mobile element in medaka fish. Nat Commun 8(1) 551 |