Tabs(ALL, DNA, BLAST, GO, Taxonomy, DO, Reference) are clickable.
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Reference Related Resource Count: 29,824
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Associated Resources List
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Category: Archaea
History : |
<-- T. Takashina TR-1. |
xref ID : |
ATCC 49778; CGMCC 1.3717; CGMCC 1.6162; DSM 6131; NBRC 101032; NCIMB 13157; VKM B-2009 |
Scientific Name : |
Haloarcula japonica Takashina et al. 1991 |
Old Scientific Name : |
Haloarcula japonica |
Source : |
Saltern soil at Noto Peninsula, Japan |
Phylogeny : |
https://identifiers.org/insdc:AB477146; https://identifiers.org/insdc:D28872; https://identifiers.org/insdc:EF645684; https://identifiers.org/insdc:EF645685; https://identifiers.org/insdc:EF645686 |
Medium Temp, etc : |
CM+YE MEDIUM, HALOBACTERIA MEDIUM, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Haloarcula japonica
|
Reference : |
Sueda R, Yoshida K, Onodera M, Fukui T, Yatsunami R, Nakamura S. (2021) Characterization of a GlgC homolog from extremely halophilic archaeon Haloarcula japonica. Biosci Biotechnol Biochem 85(6) 1441-1447
Enomoto S, Shimane Y, Ihara K, Kamekura M, Itoh T, Ohkuma M, Takahashi-Ando N, Fukushima Y, Yoshida Y, Usami R, Takai K, Minegishi H. (2020) <i>Haloarcula mannanilytica</i> sp. nov., a galactomannan-degrading haloarchaeon isolated from commercial salt. Int J Syst Evol Microbiol 70(12) 6331-6337
Nagaoka S, Sugiyama N, Yatsunami R, Nakamura S. (2021) Characterization of 3-isopropylmalate dehydrogenase from extremely halophilic archaeon Haloarcula japonica. Biosci Biotechnol Biochem 85(9) 1986-1994
Sato Y, Kimura H. (2019) Temperature-dependent expression of different guanine-plus-cytosine content 16S rRNA genes in Haloarcula strains of the class Halobacteria. Antonie Van Leeuwenhoek 112(2) 187-201
Yang Y, Cui HL, Zhou PJ, Liu SJ. (2007) Haloarcula amylolytica sp. nov., an extremely halophilic archaeon isolated from Aibi salt lake in Xin-Jiang, China. Int J Syst Evol Microbiol 57(Pt 1) 103-106
Cui HL, Zhou PJ, Oren A, Liu SJ. (2009) Intraspecific polymorphism of 16S rRNA genes in two halophilic archaeal genera, Haloarcula and Halomicrobium. Extremophiles 13(1) 31-7
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Category: Archaea
History : |
<-- DSM 3638 <-- K. O. Stetter and G. Fiala Vc 1. |
xref ID : |
ATCC 43587; CGMCC 1.2516; DSM 3638 |
Scientific Name : |
Pyrococcus furiosus Fiala and Stetter 1986 |
Old Scientific Name : |
Pyrococcus furiosus |
Source : |
Hot sediment at the beach of Porto di Levante, Vulcano Island, Italy |
Phylogeny : |
https://identifiers.org/insdc:AB603518 |
Medium Temp, etc : |
PYROCOCCUS MEDIUM, 95C |
Taxonomy : |
Pyrococcus furiosus
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Reference : |
Hamana, K., Hosoya, R., Niitsu, M., Hayashi, H., and Itoh, T. (2008) Temperature and salt dependent long linear and branched polyamine syntheses in the thermophiles belonging to the domain Archaea. J Jpn Soc Extremophiles 7 121-27
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Category: Archaea
History : |
<-- DSM 2476 <-- W. Zillig Vu13. |
xref ID : |
ATCC 35543; DSM 2476 |
Scientific Name : |
Thermococcus celer Zillig 1983 |
Old Scientific Name : |
Thermococcus celer |
Source : |
Solfataric marine water hole on a beach of Vulcano, Italy |
Phylogeny : |
https://identifiers.org/insdc:AB603519; https://identifiers.org/insdc:AY099174; https://identifiers.org/insdc:M12711; https://identifiers.org/insdc:M21529; https://identifiers.org/insdc:M67497 |
Medium Temp, etc : |
THERMOCOCCUS CELER MEDIUM, THERMOCOCCUS MEDIUM, 85C |
Taxonomy : |
Thermococcus celer
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Reference : |
Kuwabara T, Minaba M, Ogi N, Kamekura M. (2007) Thermococcus celericrescens sp. nov., a fast-growing and cell-fusing hyperthermophilic archaeon from a deep-sea hydrothermal vent. Int J Syst Evol Microbiol 57(Pt 3) 437-443
Pikuta EV, Marsic D, Itoh T, Bej AK, Tang J, Whitman WB, Ng JD, Garriott OK, Hoover RB. (2007) Thermococcus thioreducens sp. nov., a novel hyperthermophilic, obligately sulfur-reducing archaeon from a deep-sea hydrothermal vent. Int J Syst Evol Microbiol 57(Pt 7) 1612-1618
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Category: Archaea
Category: Archaea
History : |
<-- M. Kamekura <-- ATCC 33959 <-- G. Juez Ma-2.38. |
xref ID : |
ATCC 33959; CCM 3603; DSM 4427; IAM 13646; NBRC 102184; NCIMB 2188; VKM B-1756 |
Scientific Name : |
Haloferax gibbonsii Juez et al. 1986 |
Old Scientific Name : |
Haloferax gibbonsii |
Source : |
Solar saltern near Alicante, Spain |
Phylogeny : |
https://identifiers.org/insdc:AB477164; https://identifiers.org/insdc:D13378 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Haloferax gibbonsii
|
Reference : |
Zhang G, Dong X, Sun Y, Antunes A, Hikmawan T, Haroon MF, Wang J, Stingl U. (2020) <i>Haloferax profundi</i> sp. nov. and <i>Haloferax marisrubri</i> sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea. Microorganisms 8(10)
Enache M, Itoh T, Kamekura M, Teodosiu G, Dumitru L. (2007) Haloferax prahovense sp. nov., an extremely halophilic archaeon isolated from a Romanian salt lake. Int J Syst Evol Microbiol 57(Pt 2) 393-397
Allen MA, Goh F, Leuko S, Echigo A, Mizuki T, Usami R, Kamekura M, Neilan BA, Burns BP. (2008) Haloferax elongans sp. nov. and Haloferax mucosum sp. nov., isolated from microbial mats from Hamelin Pool, Shark Bay, Australia. Int J Syst Evol Microbiol 58(Pt 4) 798-802
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Category: Archaea
History : |
<-- M. Kamekura <-- ATCC 35960 <-- L. I. Hochstein S1. |
xref ID : |
ATCC 35960; CGMCC 1.2198; DSM 4425; NCIMB 13115; VKM B-1754 |
Scientific Name : |
Haloferax denitrificans (Tomlinson et al. 1986) Tindall et al. 1989 |
Old Scientific Name : |
Halobacterium denitrificans |
Source : |
Saltern in the southern portion of the San Francisco Bay |
Phylogeny : |
https://identifiers.org/insdc:AB477163; https://identifiers.org/insdc:D14128 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Haloferax denitrificans
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Reference : |
Zhang G, Dong X, Sun Y, Antunes A, Hikmawan T, Haroon MF, Wang J, Stingl U. (2020) <i>Haloferax profundi</i> sp. nov. and <i>Haloferax marisrubri</i> sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea. Microorganisms 8(10)
Enache M, Itoh T, Kamekura M, Teodosiu G, Dumitru L. (2007) Haloferax prahovense sp. nov., an extremely halophilic archaeon isolated from a Romanian salt lake. Int J Syst Evol Microbiol 57(Pt 2) 393-397
Allen MA, Goh F, Leuko S, Echigo A, Mizuki T, Usami R, Kamekura M, Neilan BA, Burns BP. (2008) Haloferax elongans sp. nov. and Haloferax mucosum sp. nov., isolated from microbial mats from Hamelin Pool, Shark Bay, Australia. Int J Syst Evol Microbiol 58(Pt 4) 798-802
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Category: Archaea
History : |
<-- IFO 14739 <-- ATCC 33500 <-- F. Rodoriguez-Valera R-4. |
xref ID : |
ATCC 33500; BCRC AR10047; CCM 3361; CGMCC 1.2630; CGMCC 1.3716; DSM 1411; IAM 13647; IFO 14739; NBRC 14739; NCIMB 2177; VKM B-1748 |
Scientific Name : |
Haloferax mediterranei (Rodriguez-Valera et al. 1983) Torreblanca et al. 1987 |
Old Scientific Name : |
Halobacterium mediterranei |
Source : |
Salt pond near Alicante, Spain |
Phylogeny : |
https://identifiers.org/insdc:AB477167; https://identifiers.org/insdc:D11107; https://identifiers.org/insdc:S39859; https://identifiers.org/insdc:S76923; https://identifiers.org/insdc:X14441 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Haloferax mediterranei
|
Reference : |
Zhang G, Dong X, Sun Y, Antunes A, Hikmawan T, Haroon MF, Wang J, Stingl U. (2020) <i>Haloferax profundi</i> sp. nov. and <i>Haloferax marisrubri</i> sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea. Microorganisms 8(10)
Enache M, Itoh T, Kamekura M, Teodosiu G, Dumitru L. (2007) Haloferax prahovense sp. nov., an extremely halophilic archaeon isolated from a Romanian salt lake. Int J Syst Evol Microbiol 57(Pt 2) 393-397
Allen MA, Goh F, Leuko S, Echigo A, Mizuki T, Usami R, Kamekura M, Neilan BA, Burns BP. (2008) Haloferax elongans sp. nov. and Haloferax mucosum sp. nov., isolated from microbial mats from Hamelin Pool, Shark Bay, Australia. Int J Syst Evol Microbiol 58(Pt 4) 798-802
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Category: Archaea
Category: Archaea
Category: Archaea
History : |
<-- ATCC 49257 <-- A. Ventosa P-423. |
xref ID : |
ATCC 49257; CCM 4147; CGMCC 1.6994; DSM 5350; NCIMB 12837; VKM B-1770 |
Scientific Name : |
Halococcus saccharolyticus Montero et al. 1990 |
Old Scientific Name : |
Halococcus saccharolyticus |
Source : |
Ponds of saltern in San Fernando, Cáidz, Spain |
Phylogeny : |
https://identifiers.org/insdc:AB004876; https://identifiers.org/insdc:AB477159 |
Medium Temp, etc : |
\, HALOALKALIPHILE MEDIUM, 37C |
Taxonomy : |
Halococcus saccharolyticus
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Reference : |
Namwong S, Tanasupawat S, Visessanguan W, Kudo T, Itoh T. (2007) Halococcus thailandensis sp. nov., from fish sauce in Thailand. Int J Syst Evol Microbiol 57(Pt 10) 2199-2203
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Category: Archaea
History : |
<-- NCIMB 2012 <-- H. Larsen DS2. |
xref ID : |
ATCC 29605; CCM 2852; CGMCC 1.2150; CGMCC 1.3715; DSM 3757; IAM 13648; IFO 14742; NBRC 14742; NCIMB 2012; VKM B-1768 |
Scientific Name : |
Haloferax volcanii (Mullakhanbhai and Larsen 1975) Torreblanca et al. 1986 |
Old Scientific Name : |
Halobacterium volcanii |
Source : |
Sediment from the Dead Sea |
Phylogeny : |
https://identifiers.org/insdc:AB477170; https://identifiers.org/insdc:K00421; https://identifiers.org/insdc:S76922; https://identifiers.org/insdc:X02127; https://identifiers.org/insdc:X02128; https://identifiers.org/insdc:X02129 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Haloferax volcanii
|
Reference : |
Zhang G, Dong X, Sun Y, Antunes A, Hikmawan T, Haroon MF, Wang J, Stingl U. (2020) <i>Haloferax profundi</i> sp. nov. and <i>Haloferax marisrubri</i> sp. nov., Isolated from the Discovery Deep Brine-Seawater Interface in the Red Sea. Microorganisms 8(10)
Enache M, Itoh T, Kamekura M, Teodosiu G, Dumitru L. (2007) Haloferax prahovense sp. nov., an extremely halophilic archaeon isolated from a Romanian salt lake. Int J Syst Evol Microbiol 57(Pt 2) 393-397
Allen MA, Goh F, Leuko S, Echigo A, Mizuki T, Usami R, Kamekura M, Neilan BA, Burns BP. (2008) Haloferax elongans sp. nov. and Haloferax mucosum sp. nov., isolated from microbial mats from Hamelin Pool, Shark Bay, Australia. Int J Syst Evol Microbiol 58(Pt 4) 798-802
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Category: Archaea
History : |
<-- IFO 14740 <-- ATCC 33755 <-- A. Oren RD-26. |
xref ID : |
ATCC 33755; CGMCC 1.2928; CIP 105330; DSM 3755; IFO 14740; NBRC 14740; NCIMB 2197; VKM B-1771 |
Scientific Name : |
Halorubrum sodomense (Oren 1983) McGenity and Grant 1996 |
Old Scientific Name : |
Halobacterium sodomense |
Source : |
Surface water from the Dead Sea |
Phylogeny : |
https://identifiers.org/insdc:AB477185; https://identifiers.org/insdc:D13379; https://identifiers.org/insdc:X82169 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, \, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Halorubrum sodomense
|
Reference : |
Mancinelli RL, Landheim R, Sánchez-Porro C, Dornmayr-Pfaffenhuemer M, Gruber C, Legat A, Ventosa A, Radax C, Ihara K, White MR, Stan-Lotter H. (2009) Halorubrum chaoviator sp. nov., a haloarchaeon isolated from sea salt in Baja California, Mexico, Western Australia and Naxos, Greece. Int J Syst Evol Microbiol 59(Pt 8) 1908-13
Pesenti PT, Sikaroodi M, Gillevet PM, Sánchez-Porro C, Ventosa A, Litchfield CD. (2008) Halorubrum californiense sp. nov., an extreme archaeal halophile isolated from a crystallizer pond at a solar salt plant in California, USA. Int J Syst Evol Microbiol 58(Pt 12) 2710-5
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Category: Archaea
History : |
<-- IAM 13179 <-- F. Rodriguez-Valera Y27. |
xref ID : |
ATCC 33960; CCM 3601; DSM 4426; IAM 13179; NBRC 102182; NCIMB 2187; VKM B-1755 |
Scientific Name : |
Haloarcula hispanica Juez et al. 1986 |
Old Scientific Name : |
Haloarcula hispanica |
Source : |
Solar saltern near Alicante, Spain |
Phylogeny : |
https://identifiers.org/insdc:AB477145; https://identifiers.org/insdc:EF645682; https://identifiers.org/insdc:EF645683 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Haloarcula hispanica
|
Reference : |
Enomoto S, Shimane Y, Ihara K, Kamekura M, Itoh T, Ohkuma M, Takahashi-Ando N, Fukushima Y, Yoshida Y, Usami R, Takai K, Minegishi H. (2020) <i>Haloarcula mannanilytica</i> sp. nov., a galactomannan-degrading haloarchaeon isolated from commercial salt. Int J Syst Evol Microbiol 70(12) 6331-6337
Sato Y, Kimura H. (2019) Temperature-dependent expression of different guanine-plus-cytosine content 16S rRNA genes in Haloarcula strains of the class Halobacteria. Antonie Van Leeuwenhoek 112(2) 187-201
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Category: Archaea
Category: Archaea
History : |
<-- DSM 639 <-- T. D. Brock 98-3. |
xref ID : |
ATCC 33909; DSM 639; IFO 15157; NBRC 15157; NCIMB 11770 |
Scientific Name : |
Sulfolobus acidocaldarius Brock et al. 1972 |
Old Scientific Name : |
Sulfolobus acidocaldarius |
Source : |
Locomotive Spring in Yellowstone National Park, WY, USA |
Phylogeny : |
https://identifiers.org/insdc:D14053; https://identifiers.org/insdc:D14876; https://identifiers.org/insdc:U05019; https://identifiers.org/insdc:U32320; https://identifiers.org/insdc:X52382 |
Medium Temp, etc : |
SULFOLOBUS MEDIUM, SULFOLOBUS MEDIUM, 70C |
Taxonomy : |
Sulfolobus acidocaldarius
|
Reference : |
Kanno N, Kato S, Ohkuma M, Matsui M, Iwasaki W, Shigeto S. (2021) Machine learning-assisted single-cell Raman fingerprinting for <i>in situ</i> and nondestructive classification of prokaryotes. iScience 24(9) 102975
Horai S, Yamauchi N, Naraoka H. (2019) Simultaneous total analysis of core and polar membrane lipids in archaea by high-performance liquid chromatography/high-resolution mass spectrometry coupled with heated electrospray ionization. Rapid Commun Mass Spectrom 33(20) 1571-1577
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Category: Archaea
History : |
<-- NCIMB 764 <-- N. E. Gibbons <-- A. G. Lochhead. |
xref ID : |
ATCC 33171; CGMCC 1.3519; CIP 104033; DSM 3754; IAM 13166; NBRC 102687; NCIMB 764; NCMB 766; NRC 34002; VKM B-1769 |
Scientific Name : |
Halobacterium salinarum (Harison and Kennedy 1922) Elazari-Volcani 1957 |
Old Scientific Name : |
Halobacterium salinarium, Serratia salinaria |
Source : |
Salted cowhide |
Phylogeny : |
https://identifiers.org/insdc:AB477150; https://identifiers.org/insdc:AJ496185 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, \, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Halobacterium salinarum
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Reference : |
Yachai M, Tanasupawat S, Itoh T, Benjakul S, Visessanguan W, Valyasevi R. (2008) Halobacterium piscisalsi sp. nov., from fermented fish (pla-ra) in Thailand. Int J Syst Evol Microbiol 58(Pt 9) 2136-40
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Category: Archaea
History : |
<-- NCIMB 777 <-- C. W. F. McClare <-- D. J. Kushner. |
xref ID : |
CGMCC 1.3707; CGMCC 1.6163; CIP 106292; DSM 3751; NCIMB 777 |
Scientific Name : |
Natrinema pallidum McGenity et al. 1998 |
Old Scientific Name : |
Halobacterium halobium |
Source : |
Salted cod |
Phylogeny : |
https://identifiers.org/insdc:AB477230; https://identifiers.org/insdc:AJ002949 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, \, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Natrinema pallidum
|
Reference : |
Tapingkae W, Tanasupawat S, Itoh T, Parkin KL, Benjakul S, Visessanguan W, Valyasevi R. (2008) Natrinema gari sp. nov., a halophilic archaeon isolated from fish sauce in Thailand. Int J Syst Evol Microbiol 58(Pt 10) 2378-83
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Category: Archaea
History : |
<-- NCIMB 2259 <-- B. J. Tindall <-- DSM 669 <-- D. Keradjopoulos <-- NRC <-- A. G. Lochhead. |
xref ID : |
ATCC 33170; DSM 669; IFO 14715; NBRC 14715; NCIMB 2259; NRC 34001; VKM B-1808 |
Scientific Name : |
Halobacterium salinarum (Harison and Kennedy 1922) Elazari-Volcani 1957 |
Old Scientific Name : |
Halobacterium cutirubrum, Halobacterium salinarium, Serratia cutirubra |
Source : |
Salted buffalo hide |
Phylogeny : |
https://identifiers.org/insdc:M10691 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, \, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Halobacterium salinarum
|
Reference : |
Morii H, Kiyonari S, Ishino Y, Koga Y. (2009) A novel biosynthetic pathway of archaetidyl-myo-inositol via archaetidyl-myo-inositol phosphate from CDP-archaeol and D-glucose 6-phosphate in methanoarchaeon Methanothermobacter thermautotrophicus cells. J Biol Chem 284(45) 30766-74
Morii H, Eguchi T, Koga Y. (2007) In vitro biosynthesis of ether-type glycolipids in the methanoarchaeon Methanothermobacter thermautotrophicus. J Bacteriol 189(11) 4053-61
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Category: Archaea
History : |
<-- IFO 15161 <-- T. Itoh TA-1. |
xref ID : |
DSM 12421; IFO 15161; NBRC 15161 |
Scientific Name : |
Sulfurisphaera ohwakuensis Kurosawa et al. 1998 |
Old Scientific Name : |
Sulfurisphaera ohwakuensis |
Source : |
Acidic hot mud, Hakone, Japan |
Phylogeny : |
https://identifiers.org/insdc:D38775 |
Medium Temp, etc : |
SULFOLOBUS MEDIUM (B), SULFOLOBUS MEDIUM (B), 75C |
Taxonomy : |
Sulfurisphaera ohwakuensis
|
Reference : |
Hamana, K., Hosoya, R., Niitsu, M., Hayashi, H., and Itoh, T. (2008) Temperature and salt dependent long linear and branched polyamine syntheses in the thermophiles belonging to the domain Archaea. J Jpn Soc Extremophiles 7 121-27
|
Category: Archaea
History : |
<-- VKM B-1733 <-- I. S. Zvyagintseva 1m. |
xref ID : |
ATCC 51197; CGMCC 1.3491; CIP 105238; JCM 10118; NCIMB 13203; VKM B-1733 |
Scientific Name : |
Halorubrum distributum (Zvyagintseva and Tarasov 1989) Oren and Ventosa 1996 |
Old Scientific Name : |
Halobacterium distributum, Halobacterium distributus, Halorubrobacterium distributum |
Source : |
Salt soil crust, Turkmenistan |
Phylogeny : |
https://identifiers.org/insdc:AB477180; https://identifiers.org/insdc:D63572; https://identifiers.org/insdc:L26170; https://identifiers.org/insdc:L27343 |
Medium Temp, etc : |
HALOBACTERIA MEDIUM, \, HALONEUTROPHILE MEDIUM, 37C |
Taxonomy : |
Halorubrum distributum
|
Reference : |
Infante-Domínguez C, de la Haba RR, Corral P, Sanchez-Porro C, Arahal DR, Ventosa A. (2020) Genome-based analyses reveal a synonymy among <i>Halorubrum distributum</i> Zvyagintseva and Tarasov 1989; Oren and Ventosa 1996, <i>Halorubrum terrestre</i> Ventosa <i>et al</i>. 2004, <i>Halorubrum arcis</i> Xu <i>et al</i>. 2007 and <i>Halorubrum litoreum</i> Cui <i>et al</i>. 2007. Emended description of <i>Halorubrum distributum</i> Zvyagintseva and Tarasov 1989; Oren and Ventosa 1996. Int J Syst Evol Microbiol 70(3) 1698-1705
Cui HL, Lin ZY, Dong Y, Zhou PJ, Liu SJ. (2007) Halorubrum litoreum sp. nov., an extremely halophilic archaeon from a solar saltern. Int J Syst Evol Microbiol 57(Pt 10) 2204-2206
Castillo AM, Gutiérrez MC, Kamekura M, Xue Y, Ma Y, Cowan DA, Jones BE, Grant WD, Ventosa A. (2007) Halorubrum ejinorense sp. nov., isolated from Lake Ejinor, Inner Mongolia, China. Int J Syst Evol Microbiol 57(Pt 11) 2538-2542
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