Tabs(ALL, DNA, BLAST, GO, Taxonomy, DO, Reference) are clickable.
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Reference Related Resource Count: 29,824
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Associated Resources List
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Category: Bacteria
Category: Bacteria
History : |
<-- T. Mitsuoka S1-3 <-- ISL <-- P. A. Hansen Lb 14 <-- S. Orla-Jensen 14 ("Thermobacterium bulgaricum"). |
xref ID : |
ATCC 11842; BCRC 10696; CCM 7190; CCUG 21450; CCUG 41390; CECT 4005; CIP 101027; DSM 20081; IAM 12472; IFO 13953; KCTC 3635; LMG 13551; LMG 6901; NBRC 13953; NCFB 1489; NCIMB 11778; NCTC 12712; NRIC 1688; VKM B-1923; VTT E-96662 |
Scientific Name : |
Lactobacillus delbrueckii subsp. bulgaricus (Orla-Jensen 1919) Weiss et al. 1984 |
Old Scientific Name : |
Lactobacillus bulgaricus |
Source : |
Bulgarian yogurt |
Phylogeny : |
https://identifiers.org/insdc:AB007908; https://identifiers.org/insdc:LC063162 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus delbrueckii subsp. bulgaricus
|
Reference : |
Yamamoto E, Watanabe R, Tooyama E, Kimura K. (2021) Effect of fumaric acid on the growth of Lactobacillus delbrueckii ssp. bulgaricus during yogurt fermentation. J Dairy Sci 104(9) 9617-9626
Tsujikawa Y, Ishikawa S, Sakane I, Yoshida KI, Osawa R. (2021) Identification of genes encoding a novel ABC transporter in Lactobacillus delbrueckii for inulin polymers uptake. Sci Rep 11(1) 16007
Srionnual S, Yanagida F, Lin LH, Hsiao KN, Chen YS. (2007) Weissellicin 110, a newly discovered bacteriocin from Weissella cibaria 110, isolated from plaa-som, a fermented fish product from Thailand. Appl Environ Microbiol 73(7) 2247-50
Sawatari Y, Yokota A. (2007) Diversity and mechanisms of alkali tolerance in lactobacilli. Appl Environ Microbiol 73(12) 3909-15
Kasuga G, Tanaka M, Harada Y, Nagashima H, Yamato T, Wakimoto A, Arakawa K, Kawai Y, Kok J, Masuda T. (2019) Homologous Expression and Characterization of Gassericin T and Gassericin S, a Novel Class IIb Bacteriocin Produced by Lactobacillus gasseri LA327. Appl Environ Microbiol 85(6)
Timmermans ML, Picott KJ, Ucciferri L, Ross AC. (2019) Culturing marine bacteria from the genus Pseudoalteromonas on a cotton scaffold alters secondary metabolite production. Microbiologyopen 8(5) e00724
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Category: Bacteria
Category: Bacteria
Category: Bacteria
History : |
<-- T. Mitsuoka S1-42 <-- ISL <-- ATCC 9649 <-- R. P. Tittsler 730 (strain Calvert) <-- M. Rogosa. |
xref ID : |
ATCC 9649; BCRC 12195; CCM 7191; CCUG 34222; CECT 286; CGMCC 1.2624; CIP 57.8; DSM 20074; IAM 12474; IFO 3202; KCTC 1047; LMG 6412; NBRC 3202; NCDO 213; NCIMB 8130; NRIC 1053; NRRL B-763; VKM B-1596; VTT E-98097 |
Scientific Name : |
Lactobacillus delbrueckii subsp. delbrueckii (Leichmann 1896) Weiss et al. 1984 |
Old Scientific Name : |
Lactobacillus delbrueckii subsp. delbrueckii |
Source : |
Sour grain mash |
Phylogeny : |
https://identifiers.org/insdc:LC063163; https://identifiers.org/insdc:M58814; https://identifiers.org/insdc:X52654 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, XYLOSE--YP BROTH, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus delbrueckii
|
Reference : |
Sawatari Y, Yokota A. (2007) Diversity and mechanisms of alkali tolerance in lactobacilli. Appl Environ Microbiol 73(12) 3909-15
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Category: Bacteria
History : |
<-- T. Mitsuoka S1-65 <-- G. Reuter Omniflora (Lactobacillus acidophilus). |
xref ID : |
KCTC 3141; LMG 18175 |
Scientific Name : |
Lactobacillus johnsonii Fujisawa et al. 1992 |
Old Scientific Name : |
Lactobacillus gasseri |
Source : |
Human intestine |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus johnsonii N6.2
|
Reference : |
Sawatari Y, Yokota A. (2007) Diversity and mechanisms of alkali tolerance in lactobacilli. Appl Environ Microbiol 73(12) 3909-15
Iwamori M, Shibagaki T, Nakata Y, Adachi S, Nomura T. (2009) Distribution of receptor glycolipids for Lactobacilli in murine digestive tract and production of antibodies cross-reactive with them by immunization of rabbits with Lactobacilli. J Biochem 146(2) 185-91
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Category: Bacteria
Category: Bacteria
History : |
<-- T. Mitsuoka S1-71 <-- G. Reuter VC (Lactobacillus acidophilus). |
xref ID : |
KCTC 3143; LMG 18176 |
Scientific Name : |
Lactobacillus gasseri Lauer and Kandler 1980 |
Old Scientific Name : |
Lactobacillus gasseri |
Source : |
Human intestine |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus phage phi jlb1
|
Reference : |
Toyoshima H, Shibahara T, Tanigawa M, Masuda N, Ishiguro C, Tanaka H, Nakanishi Y, Sakabe S. (2021) <i>Lactobacillus paragasseri</i> as a novel causative pathogen of cavernosal abscess. IDCases 26 e01320
Anand A, Sato M, Aoyagi H (2019) Screening of Phosphate-accumulating Probiotics for Potential Use in Chronic Kidney Disorder. Food Sci Technol Res 25 89-96
|
Category: Bacteria
Category: Bacteria
History : |
<-- T. Mitsuoka ChN-F-1-6 <-- G. Reuter strain VC. |
Scientific Name : |
Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus salivarius, Lactobacillus salivarius subsp. salicinius |
Source : |
Human intestine |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus salivarius DSM 20555 = ATCC 11741
|
Reference : |
Hirose M, Yoshida Y, Horii K, Hasegawa Y, Shibuya Y. (2021) Efficacy of antimicrobial photodynamic therapy with Rose Bengal and blue light against cariogenic bacteria. Arch Oral Biol 122 105024
Udayan S, Buttó LF, Rossini V, Velmurugan J, Martinez-Lopez M, Sancho D, Melgar S, O''Toole PW, Nally K. (2021) Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent. Sci Rep 11(1) 5896
Sawatari Y, Yokota A. (2007) Diversity and mechanisms of alkali tolerance in lactobacilli. Appl Environ Microbiol 73(12) 3909-15
Fang F, Flynn S, Li Y, Claesson MJ, van Pijkeren JP, Collins JK, van Sinderen D, O''Toole PW. (2008) Characterization of endogenous plasmids from Lactobacillus salivarius UCC118. Appl Environ Microbiol 74(10) 3216-28
Raftis EJ, Salvetti E, Torriani S, Felis GE, O''Toole PW. (2011) Genomic diversity of Lactobacillus salivarius. Appl Environ Microbiol 77(3) 954-65
Ryan KA, Daly P, Li Y, Hooton C, O''Toole PW. (2008) Strain-specific inhibition of Helicobacter pylori by Lactobacillus salivarius and other lactobacilli. J Antimicrob Chemother 61(4) 831-4
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Category: Bacteria
History : |
<-- T. Mitsuoka ChN-g-2-13 <-- G. Reuter B52/4d. |
Scientific Name : |
Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus salivarius, Lactobacillus salivarius subsp. salicinius |
Source : |
Human intestine |
Phylogeny : |
https://identifiers.org/insdc:LC260012 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus salivarius DSM 20555 = ATCC 11741
|
Reference : |
Udayan S, Buttó LF, Rossini V, Velmurugan J, Martinez-Lopez M, Sancho D, Melgar S, O''Toole PW, Nally K. (2021) Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent. Sci Rep 11(1) 5896
Fang F, Flynn S, Li Y, Claesson MJ, van Pijkeren JP, Collins JK, van Sinderen D, O''Toole PW. (2008) Characterization of endogenous plasmids from Lactobacillus salivarius UCC118. Appl Environ Microbiol 74(10) 3216-28
Raftis EJ, Salvetti E, Torriani S, Felis GE, O''Toole PW. (2011) Genomic diversity of Lactobacillus salivarius. Appl Environ Microbiol 77(3) 954-65
Ryan KA, Daly P, Li Y, Hooton C, O''Toole PW. (2008) Strain-specific inhibition of Helicobacter pylori by Lactobacillus salivarius and other lactobacilli. J Antimicrob Chemother 61(4) 831-4
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Category: Bacteria
History : |
<-- Y. Kosako 69 <-- M. Popoff 544 <-- ATCC 15467 <-- R. Schubert 256 <-- J. P. Crawford <-- H. Pivnick and L. R. Sabina. |
xref ID : |
ATCC 15467; BCRC 11554; CCM 7231; CCUG 25938; CECT 4221; CIP 76.15; DSM 30188; IAM 12334; IFO 13282; KCTC 12487; LMG 3755; NBRC 13282; NCIMB 13740 |
Scientific Name : |
Aeromonas caviae Popoff 1984 |
Old Scientific Name : |
Aeromonas hydrophila subsp. anaerogenes |
Source : |
Used oil emulsion |
Phylogeny : |
https://identifiers.org/insdc:AM262164; https://identifiers.org/insdc:FR870443; https://identifiers.org/insdc:LC050172; https://identifiers.org/insdc:X60409 |
Medium Temp, etc : |
NUTRIENT AGAR NO. 2, NUTRIENT BROTH WITH 0.5\% NaCl, NUTRIENT BROTH WITH 1.0\% NaCl, 30C |
Biosafety Level : |
BSL 2 |
Taxonomy : |
196025 |
Reference : |
Nakatani H, Hori K. (2021) Establishing a Percutaneous Infection Model Using Zebrafish and a Salmon Pathogen. Biology (Basel) 10(2)
|
Category: Bacteria
History : |
<-- T. Mitsuoka ChN-10-5-1. |
Scientific Name : |
Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus salivarius, Lactobacillus salivarius subsp. salicinius |
Source : |
Human intestine |
Phylogeny : |
https://identifiers.org/insdc:LC260013 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus salivarius DSM 20555 = ATCC 11741
|
Reference : |
Udayan S, Buttó LF, Rossini V, Velmurugan J, Martinez-Lopez M, Sancho D, Melgar S, O''Toole PW, Nally K. (2021) Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent. Sci Rep 11(1) 5896
Sawatari Y, Yokota A. (2007) Diversity and mechanisms of alkali tolerance in lactobacilli. Appl Environ Microbiol 73(12) 3909-15
Raftis EJ, Salvetti E, Torriani S, Felis GE, O''Toole PW. (2011) Genomic diversity of Lactobacillus salivarius. Appl Environ Microbiol 77(3) 954-65
Kamijo M, Kanazawa T, Funaki M, Nishizawa M, Yamagishi T. (2008) Effects of Rosa rugosa petals on intestinal bacteria. Biosci Biotechnol Biochem 72(3) 773-7
|
Category: Bacteria
History : |
<-- T. Mitsuoka Kd-26-3. |
Scientific Name : |
Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus salivarius, Lactobacillus salivarius subsp. salicinius |
Source : |
Human intestine |
Phylogeny : |
https://identifiers.org/insdc:LC260014 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus salivarius DSM 20555 = ATCC 11741
|
Reference : |
Udayan S, Buttó LF, Rossini V, Velmurugan J, Martinez-Lopez M, Sancho D, Melgar S, O''Toole PW, Nally K. (2021) Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent. Sci Rep 11(1) 5896
Fang F, Flynn S, Li Y, Claesson MJ, van Pijkeren JP, Collins JK, van Sinderen D, O''Toole PW. (2008) Characterization of endogenous plasmids from Lactobacillus salivarius UCC118. Appl Environ Microbiol 74(10) 3216-28
Raftis EJ, Salvetti E, Torriani S, Felis GE, O''Toole PW. (2011) Genomic diversity of Lactobacillus salivarius. Appl Environ Microbiol 77(3) 954-65
Ryan KA, Daly P, Li Y, Hooton C, O''Toole PW. (2008) Strain-specific inhibition of Helicobacter pylori by Lactobacillus salivarius and other lactobacilli. J Antimicrob Chemother 61(4) 831-4
|
Category: Bacteria
History : |
<-- T. Mitsuoka PNF-7-6. |
xref ID : |
KCTC 3156 |
Scientific Name : |
Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus salivarius, Lactobacillus salivarius subsp. salicinius |
Source : |
Swine intestine |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus salivarius DSM 20555 = ATCC 11741
|
Reference : |
Udayan S, Buttó LF, Rossini V, Velmurugan J, Martinez-Lopez M, Sancho D, Melgar S, O''Toole PW, Nally K. (2021) Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent. Sci Rep 11(1) 5896
Fang F, Flynn S, Li Y, Claesson MJ, van Pijkeren JP, Collins JK, van Sinderen D, O''Toole PW. (2008) Characterization of endogenous plasmids from Lactobacillus salivarius UCC118. Appl Environ Microbiol 74(10) 3216-28
Raftis EJ, Salvetti E, Torriani S, Felis GE, O''Toole PW. (2011) Genomic diversity of Lactobacillus salivarius. Appl Environ Microbiol 77(3) 954-65
Ryan KA, Daly P, Li Y, Hooton C, O''Toole PW. (2008) Strain-specific inhibition of Helicobacter pylori by Lactobacillus salivarius and other lactobacilli. J Antimicrob Chemother 61(4) 831-4
Fang F, Li Y, Bumann M, Raftis EJ, Casey PG, Cooney JC, Walsh MA, O''Toole PW. (2009) Allelic variation of bile salt hydrolase genes in Lactobacillus salivarius does not determine bile resistance levels. J Bacteriol 191(18) 5743-57
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Category: Bacteria
History : |
<-- T. Mitsuoka PNF-5-10. |
xref ID : |
KCTC 3157 |
Scientific Name : |
Ligilactobacillus salivarius (Rogosa et al. 1953) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus salivarius, Lactobacillus salivarius subsp. salicinius |
Source : |
Swine intestine |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus salivarius DSM 20555 = ATCC 11741
|
Reference : |
Udayan S, Buttó LF, Rossini V, Velmurugan J, Martinez-Lopez M, Sancho D, Melgar S, O''Toole PW, Nally K. (2021) Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent. Sci Rep 11(1) 5896
Raftis EJ, Salvetti E, Torriani S, Felis GE, O''Toole PW. (2011) Genomic diversity of Lactobacillus salivarius. Appl Environ Microbiol 77(3) 954-65
Ryan KA, Daly P, Li Y, Hooton C, O''Toole PW. (2008) Strain-specific inhibition of Helicobacter pylori by Lactobacillus salivarius and other lactobacilli. J Antimicrob Chemother 61(4) 831-4
|
Category: Bacteria
History : |
<-- T. Mitsuoka ChN-4-2-6. |
xref ID : |
ATCC 43564 |
Scientific Name : |
Ligilactobacillus agilis (Weiss et al. 1982) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus agilis |
Source : |
Chicken intestine |
Phylogeny : |
https://identifiers.org/insdc:LC260015 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus agilis DSM 20509
|
Reference : |
Meimandipour A, Shuhaimi M, Hair-Bejo M, Azhar K, Kabeir BM, Rasti B, Yazid AM. (2009) In vitro fermentation of broiler cecal content: the role of lactobacilli and pH value on the composition of microbiota and end products fermentation. Lett Appl Microbiol 49(4) 415-20
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Category: Bacteria
History : |
<-- T. Mitsuoka S2-5 <-- IAM 1043 <-- ATU L-1 <-- NIAH. |
xref ID : |
IAM 1043 |
Scientific Name : |
Lacticaseibacillus paracasei subsp. paracasei (Collins et al. 1989) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus casei subsp. casei, Lactobacillus paracasei subsp. paracasei |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 37C |
Taxonomy : |
Lactobacillus paracasei N1115
|
Reference : |
Masuya H, Endoh R, Ando Y, Tabata M (2019) Fungi associated with Cryphalus rhusi (Scolytinae; Coleoptera) infesting lacquer tree, Toxicodendron vernicifluum. J Forest Res 24 1-5
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Category: Bacteria
History : |
<-- T. Mitsuoka S2-26 <-- ISL <-- ATCC 10012 <-- J. Alsberg <-- R. Kuhn 10 S ("Streptobacterium plantarum"). |
xref ID : |
ATCC 10012; BCRC 14059; DSM 20246; JCM 1550; KCTC 3105; NCFB 352; NCIMB 8016 |
Scientific Name : |
Lactiplantibacillus plantarum subsp. plantarum (Orla-Jensen 1919) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus plantarum, Lactobacillus plantarum subsp. plantarum |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 30C |
Taxonomy : |
Lactobacillus plantarum 80
|
Reference : |
Claudia Milena Rodríguez-López, Ana María Guzmán-Beltrán, María Camila Lara-Morales, Elianna Castillo, Pedro F. B. Brandão (2020) AISLAMIENTO E IDENTIFICACIÓN DE Lactobacillus spp. (LACTOBACILLACEAE) RESISTENTES A Cd(II) Y As(III) RECUPERADOS DE FERMENTO DE CACAO Acta Biológica Colombiana 26 19-29
Anand A, Sato M, Aoyagi H (2019) Screening of Phosphate-accumulating Probiotics for Potential Use in Chronic Kidney Disorder. Food Sci Technol Res 25 89-96
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Category: Bacteria
History : |
<-- T. Mitsuoka S2-35 <-- IAM 1041 <-- ATU L-2 <-- ATCC 8014 <-- E. McCoy 17-5 ("Lactobacillus arabinosus"). |
xref ID : |
AHU 1413; ATCC 8014; ATU L-2; BCRC 10357; BUCSAV 214; BUCSAV 449; CCM 1904; CCUG 11253; CCUG 9289; CECT 220; CECT 4308; CGMCC 1.1856; CIP A159; DSM 20205; IAM 1041; ICPB 2080; IFO 3070; JCM 6651; KCTC 1048; KCTC 21024; LMG 1284; NBIMCC 1009; NBRC 3070; NCCB 46043; NCFB 82; NCIMB 6376; NCIMB 8014; NCIMB 8030; NCIMB 8864; NCIMB 8960; NCTC 6376; NRIC 1064; VKM B-1922; VKM B-578; VTT E-71034 |
Scientific Name : |
Lactiplantibacillus plantarum subsp. plantarum (Orla-Jensen 1919) Zheng et al. 2020 |
Old Scientific Name : |
Lactobacillus plantarum, Lactobacillus plantarum subsp. plantarum |
Source : |
Corn silage |
Phylogeny : |
https://identifiers.org/insdc:M58827 |
Medium Temp, etc : |
BL AGAR (GLUCOSE BLOOD LIVER AGAR), GAM SEMISOLID, MRS MEDIUM, NUTRIENT BROTH, 30C |
Taxonomy : |
Lactobacillus plantarum 80
|
Reference : |
Keiji Jindo, Marino S. Morikawa Sakura (2020) Innovative Feasibility Study for the Reclamation of the Cascajo Wetlands in Peru Utilizing Sustainable Technologies Water 12 1097
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