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Reference Related Resource Count: 23,108

Organism Prokaryotes (E. coli) Category Transposon insertion disruptant strain or clone Strain

Associated Resources List

Prokaryotes (E. coli):

JD20145 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	259303
MG1655 Gene name :	phoE
Gene Ontology :	GO:0005215, GO:0006810, GO:0006811, GO:0006950, GO:0009279, GO:0016020, GO:0016021, GO:0019867
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD20181 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	278332
MG1655 Gene name :	afuB
Taxonomy :	Escherichia coli
Reference :	Kaito C, Yoshikai H, Wakamatsu A, Miyashita A, Matsumoto Y, Fujiyuki T, Kato M, Ogura Y, Hayashi T, Isogai T, Sekimizu K. (2020) Non-pathogenic Escherichia coli acquires virulence by mutating a growth-essential LPS transporter. PLoS Pathog 16(4) e1008469

Prokaryotes (E. coli):

JD20450 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	179465
MG1655 Gene name :	dgt
Gene Ontology :	GO:0000287, GO:0003824, GO:0008832, GO:0016787, GO:0046039
Taxonomy :	Escherichia coli
Reference :	Itsko M, Schaaper RM. (2011) The dgt gene of Escherichia coli facilitates thymine utilization in thymine-requiring strains. Mol Microbiol 81(5) 1221-32

Prokaryotes (E. coli):

JD20807 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	584779
MG1655 Gene name :	ompT
Gene Ontology :	GO:0009279, GO:0016020, GO:0016021, GO:0016787, GO:0019867, GO:0004175, GO:0004190, GO:0006508, GO:0008233
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD20810 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	594273
MG1655 Gene name :	cusR
Gene Ontology :	GO:0006355, GO:0007600, GO:0000156, GO:0000160, GO:0003677, GO:0005507, GO:0005737, GO:0006350
Taxonomy :	Escherichia coli
Reference :	Yamamoto K, Ishihama A. (2005) Transcriptional response of Escherichia coli to external copper. Mol Microbiol 56(1) 215-27

Prokaryotes (E. coli):

JD20835 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	645521
MG1655 Gene name :	citT
Gene Ontology :	GO:0005215, GO:0005886, GO:0006810, GO:0006814, GO:0015297, GO:0016020, GO:0016021
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD20836 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	645696
MG1655 Gene name :	citT
Gene Ontology :	GO:0005215, GO:0005886, GO:0006810, GO:0006814, GO:0015297, GO:0016020, GO:0016021
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD21009 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	985724
MG1655 Gene name :	ompF
Gene Ontology :	GO:0005215, GO:0006810, GO:0006811, GO:0009279, GO:0009597, GO:0016020, GO:0016021, GO:0019867, GO:0046718
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD21084 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1380025
MG1655 Gene name :	ompG
Gene Ontology :	GO:0006810, GO:0006811, GO:0009279, GO:0016020, GO:0016021, GO:0019867
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD21162 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1584460
MG1655 Gene name :	ydeP
Gene Ontology :	GO:0051536, GO:0051539, GO:0005488, GO:0005506, GO:0005515, GO:0008863, GO:0016491, GO:0030151, GO:0046872
Taxonomy :	Escherichia coli
Reference :	Krin E, Danchin A, Soutourina O. (2010) Decrypting the H-NS-dependent regulatory cascade of acid stress resistance in Escherichia coli. BMC Microbiol 10 273

Prokaryotes (E. coli):

JD21298 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1912485
MG1655 Gene name :	prc
Gene Ontology :	GO:0042597, GO:0004252, GO:0005515, GO:0005886, GO:0006508, GO:0008233, GO:0008236, GO:0016020, GO:0016787, GO:0019132
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD21989 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1019184
MG1655 Gene name :	ompA
Gene Ontology :	GO:0009279, GO:0009597, GO:0016020, GO:0016021, GO:0019867, GO:0046718, GO:0000746, GO:0005198, GO:0005515, GO:0006810, GO:0006811
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD22094 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1108835
MG1655 Gene name :	opgG
Taxonomy :	Escherichia coli
Reference :	Murakami K, Nasu H, Fujiwara T, Takatsu N, Yoshida N, Furuta K, Kaito C. (2021) The Absence of Osmoregulated Periplasmic Glucan Confers Antimicrobial Resistance and Increases Virulence in Escherichia coli. J Bacteriol 203(12) e0051520

Prokaryotes (E. coli):

JD22156 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1162114
MG1655 Gene name :	lpoB
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD22456 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1434867
MG1655 Gene name :	ompN
Gene Ontology :	GO:0005215, GO:0006810, GO:0006811, GO:0009279, GO:0016020, GO:0016021, GO:0019867
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

Prokaryotes (E. coli):

JD22571 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1513730
MG1655 Gene name :	patD
Taxonomy :	Escherichia coli
Reference :	Kurihara S, Oda S, Tsuboi Y, Kim HG, Oshida M, Kumagai H, Suzuki H. (2008) gamma-Glutamylputrescine synthetase in the putrescine utilization pathway of Escherichia coli K-12. J Biol Chem 283(29) 19981-90

Prokaryotes (E. coli):

JD22799 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	1724173
MG1655 Gene name :	nemR
Taxonomy :	Escherichia coli
Reference :	Umezawa Y, Shimada T, Kori A, Yamada K, Ishihama A. (2008) The uncharacterized transcription factor YdhM is the regulator of the nemA gene, encoding N-ethylmaleimide reductase. J Bacteriol 190(17) 5890-7

Prokaryotes (E. coli):

JD23488 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	2736032
MG1655 Gene name :	pheA
Gene Ontology :	GO:0005737, GO:0008652, GO:0009073, GO:0009094, GO:0016829, GO:0005515, GO:0016853, GO:0004106, GO:0003824, GO:0004664
Taxonomy :	Escherichia coli
Reference :	Nakajima M, Nishino Y, Tamura M, Mase K, Masai E, Otsuka Y, Nakamura M, Sato K, Fukuda M, Shigehara K, Ohara S, Katayama Y, Kajita S. (2009) Microbial conversion of glucose to a novel chemical building block, 2-pyrone-4,6-dicarboxylic acid. Metab Eng 11(4-5) 213-20

Prokaryotes (E. coli):

JD23490 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	2737873
MG1655 Gene name :	tyrA
Gene Ontology :	GO:0003824, GO:0004106, GO:0004665, GO:0005488, GO:0005737, GO:0016853, GO:0009073, GO:0008977, GO:0008652, GO:0008152, GO:0006571, GO:0016491
Taxonomy :	Escherichia coli
Reference :	Nakajima M, Nishino Y, Tamura M, Mase K, Masai E, Otsuka Y, Nakamura M, Sato K, Fukuda M, Shigehara K, Ohara S, Katayama Y, Kajita S. (2009) Microbial conversion of glucose to a novel chemical building block, 2-pyrone-4,6-dicarboxylic acid. Metab Eng 11(4-5) 213-20

Prokaryotes (E. coli):

JD24024 more

Available

National Institute of GENETICS

Category: Transposon insertion disruptant

Insertion site (inserted after) :	3176309
MG1655 Gene name :	tolC
Gene Ontology :	GO:0005215, GO:0006810, GO:0009279, GO:0015031, GO:0016020, GO:0016021, GO:0019867
Taxonomy :	Escherichia coli
Reference :	Yoshida,N., Watanabe,S., Miyamoto,Y. and Kiyoshi,K. () Acid stimulus-triggered acquisition of competency in Escherichia coli. Current Trends in M icrobiology.

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