Tabs(ALL, DNA, BLAST, GO, Taxonomy, DO, Reference) are clickable.
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Reference Related Resource Count : 33,482
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Associated Resources List
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1273 items
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Organism |
strain |
Arabidopsis / Cultured plant cells, genes
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Arabidopsis Ds transposon tagged line |
163 |
|
plant cell line |
22 |
|
individual line (mutant and transgenic line) |
17 |
|
natural accession |
1 |
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natural accession (bulk) |
30 |
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Arabidopsis nuclear-encoded chloroplast protein mutant |
1 |
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Organism |
DNA |
Arabidopsis / Cultured plant cells, genes
|
Arabidopsis Full-length cDNA clones |
918 |
|
Physcomitrella patens full-length cDNA clones |
100 |
|
Poplar Full-length cDNA clones |
14 |
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Tobacco EST clones |
1 |
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Brachypodium distachyon full-length cDNA |
5 |
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Arabidopsis Transcription Factor clone |
1 |
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Arabidopsis / Cultured plant cells, genes:
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psh12304
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst00362
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Available
|
Riken BRC
|
Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst20504
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst00546
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
53-2997-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT4G36470 |
Depositor / Developer : |
RIKEN CSRS/Dr.Sakakibara |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Mashiguchi K, Seto Y, Onozuka Y, Suzuki S, Takemoto K, Wang Y, Dong L, Asami K, Noda R, Kisugi T, Kitaoka N, Akiyama K, Bouwmeester H, Yamaguchi S. (2022) A carlactonoic acid methyltransferase that contributes to the inhibition of shoot branching in <i>Arabidopsis</i>. Proc Natl Acad Sci U S A 119(14) e2111565119
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Arabidopsis / Cultured plant cells, genes:
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pst13725
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst15666
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst16228
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
13-3235-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT1G56650 |
Depositor / Developer : |
RIKEN BRC/Dr.Iuchi |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Kim S, Song H, Hur Y. (2021) Intron-retained radish (Raphanus sativus L.) RsMYB1 transcripts found in colored-taproot lines enhance anthocyanin accumulation in transgenic Arabidopsis plants. Plant Cell Rep 40(9) 1735-1749
Appelhagen I, Jahns O, Bartelniewoehner L, Sagasser M, Weisshaar B, Stracke R. (2011) Leucoanthocyanidin Dioxygenase in Arabidopsis thaliana: characterization of mutant alleles and regulation by MYB-BHLH-TTG1 transcription factor complexes. Gene 484(1-2) 61-8
Zhang B, Hülskamp M. (2019) Evolutionary Analysis of MBW Function by Phenotypic Rescue in <i>Arabidopsis thaliana</i>. Front Plant Sci 10 375
Gonzalez A, Zhao M, Leavitt JM, Lloyd AM. (2008) Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings. Plant J 53(5) 814-27
Shin DH, Choi M, Kim K, Bang G, Cho M, Choi SB, Choi G, Park YI. (2013) HY5 regulates anthocyanin biosynthesis by inducing the transcriptional activation of the MYB75/PAP1 transcription factor in Arabidopsis. FEBS Lett 587(10) 1543-7
Teng S, Keurentjes J, Bentsink L, Koornneef M, Smeekens S. (2005) Sucrose-specific induction of anthocyanin biosynthesis in Arabidopsis requires the MYB75/PAP1 gene. Plant Physiol 139(4) 1840-52
Bhargava A, Mansfield SD, Hall HC, Douglas CJ, Ellis BE. (2010) MYB75 functions in regulation of secondary cell wall formation in the Arabidopsis inflorescence stem. Plant Physiol 154(3) 1428-38
Ilk N, Ding J, Ihnatowicz A, Koornneef M, Reymond M. (2015) Natural variation for anthocyanin accumulation under high-light and low-temperature stress is attributable to the ENHANCER OF AG-4 2 (HUA2) locus in combination with PRODUCTION OF ANTHOCYANIN PIGMENT1 (PAP1) and PAP2. New Phytol 206(1) 422-435
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Arabidopsis / Cultured plant cells, genes:
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pst19547
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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psh16445
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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psh17003
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
13-5238-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT4G02270 |
Depositor / Developer : |
RIKEN BRC/Dr.Iuchi |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Uno H, Tanaka-Takada N, Hattori M, Fukuda M, Maeshima M. (2019) A cell-wall protein SRPP provides physiological integrity to the Arabidopsis seed. J Plant Res 132(1) 145-154
Tanaka N, Uno H, Okuda S, Gunji S, Ferjani A, Aoyama T, Maeshima M. (2017) SRPP, a Cell Wall Protein is Involved in Development and Protection of Seeds and Root Hairs in Arabidopsis thaliana. Plant Cell Physiol 58(4) 760-769
Uno H, Tanaka-Takada N, Sato R, Maeshima M. (2017) Enhancement of cell wall protein SRPP expression during emergent root hair development in Arabidopsis. Plant Signal Behav 12(10) e1368940
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Arabidopsis / Cultured plant cells, genes:
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pst10499
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
11-1157-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT3G60630 |
Depositor / Developer : |
RIKEN BRC/Dr.Iuchi |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Lee MH, Kim B, Song SK, Heo JO, Yu NI, Lee SA, Kim M, Kim DG, Sohn SO, Lim CE, Chang KS, Lee MM, Lim J. (2008) Large-scale analysis of the GRAS gene family in Arabidopsis thaliana. Plant Mol Biol 67(6) 659-70
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Arabidopsis / Cultured plant cells, genes:
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pst10702
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
11-1619-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT2G29070 |
Depositor / Developer : |
RIKEN BRC/Dr.Iuchi |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Lee MH, Kim B, Song SK, Heo JO, Yu NI, Lee SA, Kim M, Kim DG, Sohn SO, Lim CE, Chang KS, Lee MM, Lim J. (2008) Large-scale analysis of the GRAS gene family in Arabidopsis thaliana. Plant Mol Biol 67(6) 659-70
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Arabidopsis / Cultured plant cells, genes:
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pst13186
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
12-0763-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT3G54600 |
Depositor / Developer : |
RIKEN PSC/Dr.Saito |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Cheng Y, Zhou Y, Yang Y, Chi YJ, Zhou J, Chen JY, Wang F, Fan B, Shi K, Zhou YH, Yu JQ, Chen Z. (2012) Structural and functional analysis of VQ motif-containing proteins in Arabidopsis as interacting proteins of WRKY transcription factors. Plant Physiol 159(2) 810-25
Zhou J, Wang J, Cheng Y, Chi YJ, Fan B, Yu JQ, Chen Z. (2013) NBR1-mediated selective autophagy targets insoluble ubiquitinated protein aggregates in plant stress responses. PLoS Genet 9(1) e1003196
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Arabidopsis / Cultured plant cells, genes:
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pst15534
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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psh14107
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst00015
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Resource Name : |
53-2863-1 |
Species : |
Arabidopsis thaliana |
AGI Locus : |
AT1G05810 |
Depositor / Developer : |
RIKEN BRC/Dr.Iuchi |
Taxonomy : |
Arabidopsis thaliana
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Reference : |
Karim S, Alezzawi M, Garcia-Petit C, Solymosi K, Khan NZ, Lindquist E, Dahl P, Hohmann S, Aronsson H. (2014) A novel chloroplast localized Rab GTPase protein CPRabA5e is involved in stress, development, thylakoid biogenesis and vesicle transport in Arabidopsis. Plant Mol Biol 84(6) 675-92
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Arabidopsis / Cultured plant cells, genes:
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pst00837
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst00838
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst00839
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pst11274
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Available
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Riken BRC
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Category: Arabidopsis Ds transposon tagged line
Arabidopsis / Cultured plant cells, genes:
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pda00075
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00082
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00088
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00106
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Accession Number : |
AY037203
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cDNA clone name : |
RAFL02-08-M10 |
full-length acc AGI code : |
AT1G32640.1 |
Taxonomy : |
Arabidopsis
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Reference : |
Nakata M, Mitsuda N, Herde M, Koo AJ, Moreno JE, Suzuki K, Howe GA, Ohme-Takagi M. (2013) A bHLH-type transcription factor, ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR/JA-ASSOCIATED MYC2-LIKE1, acts as a repressor to negatively regulate jasmonate signaling in arabidopsis. Plant Cell 25(5) 1641-56
Takaoka Y, Suzuki K, Nozawa A, Takahashi H, Sawasaki T, Ueda M. (2022) Protein-protein interactions between jasmonate-related master regulator MYC and transcriptional mediator MED25 depend on a short binding domain. J Biol Chem 298(1) 101504
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Arabidopsis / Cultured plant cells, genes:
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pda00113
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00123
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00129
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Accession Number : |
AY037186
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cDNA clone name : |
RAFL02-08-A23 |
full-length acc AGI code : |
AT4G00180.2 |
Taxonomy : |
Arabidopsis
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Reference : |
Neumetzler L, Humphrey T, Lumba S, Snyder S, Yeats TH, Usadel B, Vasilevski A, Patel J, Rose JK, Persson S, Bonetta D. (2012) The FRIABLE1 gene product affects cell adhesion in Arabidopsis. PLoS One 7(8) e42914
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Arabidopsis / Cultured plant cells, genes:
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pda00182
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00216
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00221
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00237
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00243
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00244
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00289
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00319
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00330
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00366
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00376
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Available
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Riken BRC
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Category: Arabidopsis Full-length cDNA clones
Accession Number : |
AY039951
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cDNA clone name : |
RAFL04-14-H04 |
full-length acc AGI code : |
AT5G44070.1 |
Taxonomy : |
Arabidopsis
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Reference : |
Zhang D, Tang D, Yamamoto T, Kato Y, Horiuchi S, Ogawa S, Yoshimura E, Suzuki M. (2019) Improving biosynthesis of AuPd core-shell nanoparticles through Escherichia coli with the assistance of phytochelatin for catalytic enhanced chemiluminescence and benzyl alcohol oxidation. J Inorg Biochem 199 110795
Zhang D, Yamamoto T, Tang D, Kato Y, Horiuchi S, Ogawa S, Yoshimura E, Suzuki M. (2019) Enhanced biosynthesis of CdS nanoparticles through Arabidopsis thaliana phytochelatin synthase-modified Escherichia coli with fluorescence effect in detection of pyrogallol and gallic acid. Talanta 195 447-455
Ogawa S, Yoshidomi T, Shirabe T, Yoshimura E. (2010) HPLC method for the determination of phytochelatin synthase activity specific for soft metal ion chelators. J Inorg Biochem 104(4) 442-5
Ogawa S, Yoshidomi T, Yoshimura E. (2011) Cadmium(II)-stimulated enzyme activation of Arabidopsis thaliana phytochelatin synthase 1. J Inorg Biochem 105(1) 111-7
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Arabidopsis / Cultured plant cells, genes:
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pda00379
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Available
|
Riken BRC
|
Category: Arabidopsis Full-length cDNA clones
Arabidopsis / Cultured plant cells, genes:
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pda00396
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Available
|
Riken BRC
|
Category: Arabidopsis Full-length cDNA clones
Accession Number : |
AF370231
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cDNA clone name : |
RAFL04-14-H12 |
full-length acc AGI code : |
AT4G36540.1 |
Taxonomy : |
Arabidopsis
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Reference : |
Endo H, Yamaguchi M, Tamura T, Nakano Y, Nishikubo N, Yoneda A, Kato K, Kubo M, Kajita S, Katayama Y, Ohtani M, Demura T. (2015) Multiple classes of transcription factors regulate the expression of VASCULAR-RELATED NAC-DOMAIN7, a master switch of xylem vessel differentiation. Plant Cell Physiol 56(2) 242-54
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