![](/images/sankakuIcon.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D) Tabs(ALL, DNA, BLAST, GO, Taxonomy, DO, Reference) are clickable.
|
Reference Related Resource Count : 33,482
|
Associated Resources List
|
110 items
|
|
|
|
Organism |
strain |
Ciona intestinalis
|
Mutant |
6 |
|
Marker |
30 |
|
Enhancer detection |
24 |
|
Jump starter/Mutator |
11 |
|
Other |
1 |
|
MASK |
10 |
|
|
Organism |
DNA |
Ciona intestinalis
|
Construct |
28 |
|
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Mutant
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Mutant
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Mutant
Vector : |
pMiTSAdTPOG |
Phenotype : |
loss of gill, atrial siphon muscle and body wall muscle |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
|
Ciona intestinalis:
|
Hox12TAL2
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Mutant
Ciona intestinalis:
|
VPTAL2
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Mutant
Ciona intestinalis:
|
VPTAL3
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Mutant
Ciona intestinalis:
|
Tg[MiCiTnIG]2
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiTnIG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Kawai N, Ochiai H, Sakuma T, Yamada L, Sawada H, Yamamoto T, Sasakura Y. (2012) Efficient targeted mutagenesis of the chordate Ciona intestinalis genome with zinc-finger nucleases. Dev Growth Differ 54(5) 535-45
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
Yoshida K, Hozumi A, Treen N, Sakuma T, Yamamoto T, Shirae-Kurabayashi M, Sasakura Y. (2017) Germ cell regeneration-mediated, enhanced mutagenesis in the ascidian Ciona intestinalis reveals flexible germ cell formation from different somatic cells. Dev Biol 423(2) 111-125
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiEpiIG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiEpiIG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Ciona intestinalis:
|
Tg[MiCiBraG]1
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiBraG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
|
Ciona intestinalis:
|
Tg[MiCiBraG]2
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiBraG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
Sasakura Y. (2018) Germline Transgenesis in Ciona. Adv Exp Med Biol 1029 109-119
|
Ciona intestinalis:
|
Tg[MiCiNutG]3
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiNutG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Satoh T, Iitsuka T, Shiraishi A, Hozumi A, Satake H, Sasakura Y. (2018) piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A. Sci Rep 8(1) 5869
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
Yoshida K, Hozumi A, Treen N, Sakuma T, Yamamoto T, Shirae-Kurabayashi M, Sasakura Y. (2017) Germ cell regeneration-mediated, enhanced mutagenesis in the ascidian Ciona intestinalis reveals flexible germ cell formation from different somatic cells. Dev Biol 423(2) 111-125
|
Ciona intestinalis:
|
Tg[MiCiNutG]4
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiNutG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Satoh T, Iitsuka T, Shiraishi A, Hozumi A, Satake H, Sasakura Y. (2018) piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A. Sci Rep 8(1) 5869
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Vector : |
pMiCiTniGCiprmG |
Taxonomy : |
Ciona intestinalis
|
Reference : |
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
|
Ciona intestinalis:
|
Tg[MiCiTrlG]1
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Ciona intestinalis:
|
Tg[MiCiAKRK]1
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Marker
Ciona intestinalis:
|
pSPeGFP
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pMiDestF
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Taxonomy : |
Ciona intestinalis
|
Reference : |
Kawada T, Shiraishi A, Matsubara S, Hozumi A, Horie T, Sasakura Y, Satake H. (2021) Vasopressin Promoter Transgenic and Vasopressin Gene-Edited Ascidian, <i>Ciona intestinalis</i> Type A (<i>Ciona robusta</i>): Innervation, Gene Expression Profiles, and Phenotypes. Front Endocrinol (Lausanne) 12 668564
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
|
Ciona intestinalis:
|
pMiEV
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pMiCiEf1aFG
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pMiCiCesAG
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pSPCiTrlG
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pMiCiTrlG
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pHTBeGFP
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pSP-Kaede
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Taxonomy : |
Ciona intestinalis
|
Reference : |
Cao C, Lemaire LA, Wang W, Yoon PH, Choi YA, Parsons LR, Matese JC, Wang W, Levine M, Chen K. (2019) Comprehensive single-cell transcriptome lineages of a proto-vertebrate. Nature 571(7765) 349-354
Sakamoto A, Hozumi A, Shiraishi A, Satake H, Horie T, Sasakura Y. (2022) The TRP channel PKD2 is involved in sensing the mechanical stimulus of adhesion for initiating metamorphosis in the chordate Ciona. Dev Growth Differ 64(7) 395-408
Horie T, Horie R, Chen K, Cao C, Nakagawa M, Kusakabe TG, Satoh N, Sasakura Y, Levine M. (2018) Regulatory cocktail for dopaminergic neurons in a protovertebrate identified by whole-embryo single-cell transcriptomics. Genes Dev 32(19-20) 1297-1302
|
Ciona intestinalis:
|
pSPCiVGLUTK
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pRN3CiHox1
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pSPeCFP-ter
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
Ciona intestinalis:
|
pSPeCFPCiHox1
|
Available
|
University of Tsukuba
|
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
![](/images/bulletgs.gif;jsessionid=F23DDE469D49B8B3D5EDD3470954476D)
Category: Construct
|