 Tabs(ALL, DNA, BLAST, GO, Taxonomy, DO, Reference) are clickable.
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Reference Related Resource Count : 23,108
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Associated Resources List
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104 items
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| Organism |
strain |
Ciona intestinalis
|
Marker |
30 |
|
| Enhancer detection |
24 |
|
| Jump starter/Mutator |
11 |
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| Other |
1 |
|
| MASK |
10 |
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| Organism |
DNA |
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Ciona intestinalis
|
Construct |
28 |
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Ciona intestinalis:
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Tg[MiCiTnIG]2
|
 Available
|
University of Tsukuba
|
Category: Marker
| Vector : |
pMiCiTnIG |
| Taxonomy : |
Ciona intestinalis
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| Reference : |
Kawai N, Ochiai H, Sakuma T, Yamada L, Sawada H, Yamamoto T, Sasakura Y. (2012) Efficient targeted mutagenesis of the chordate Ciona intestinalis genome with zinc-finger nucleases. Dev Growth Differ 54(5) 535-45
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
Yoshida K, Hozumi A, Treen N, Sakuma T, Yamamoto T, Shirae-Kurabayashi M, Sasakura Y. (2017) Germ cell regeneration-mediated, enhanced mutagenesis in the ascidian Ciona intestinalis reveals flexible germ cell formation from different somatic cells. Dev Biol 423(2) 111-125
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Category: Marker
| Vector : |
pMiCiEpiIG |
| Taxonomy : |
Ciona intestinalis
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| Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
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Category: Marker
| Vector : |
pMiCiEpiIG |
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
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Category: Marker
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Ciona intestinalis:
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Tg[MiCiBraG]1
|
Available
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University of Tsukuba
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Category: Marker
| Vector : |
pMiCiBraG |
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
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Ciona intestinalis:
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Tg[MiCiBraG]2
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Available
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University of Tsukuba
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Category: Marker
| Vector : |
pMiCiBraG |
| Taxonomy : |
Ciona intestinalis
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| Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
Sasakura Y. (2018) Germline Transgenesis in Ciona. Adv Exp Med Biol 1029 109-119
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Ciona intestinalis:
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Tg[MiCiNutG]3
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Available
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University of Tsukuba
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Category: Marker
| Vector : |
pMiCiNutG |
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Satoh T, Iitsuka T, Shiraishi A, Hozumi A, Satake H, Sasakura Y. (2018) piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A. Sci Rep 8(1) 5869
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
Yoshida K, Hozumi A, Treen N, Sakuma T, Yamamoto T, Shirae-Kurabayashi M, Sasakura Y. (2017) Germ cell regeneration-mediated, enhanced mutagenesis in the ascidian Ciona intestinalis reveals flexible germ cell formation from different somatic cells. Dev Biol 423(2) 111-125
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Ciona intestinalis:
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Tg[MiCiNutG]4
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Available
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University of Tsukuba
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Category: Marker
| Vector : |
pMiCiNutG |
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y. (2007) Culture of Ciona intestinalis in closed systems. Dev Dyn 236(7) 1832-40
Satoh T, Iitsuka T, Shiraishi A, Hozumi A, Satake H, Sasakura Y. (2018) piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A. Sci Rep 8(1) 5869
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
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Category: Marker
| Vector : |
pMiCiTniGCiprmG |
| Taxonomy : |
Ciona intestinalis
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| Reference : |
Sasakura Y, Kanda M, Ikeda T, Horie T, Kawai N, Ogura Y, Yoshida R, Hozumi A, Satoh N, Fujiwara S. (2012) Retinoic acid-driven Hox1 is required in the epidermis for forming the otic/atrial placodes during ascidian metamorphosis. Development 139(12) 2156-60
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
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Ciona intestinalis:
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Tg[MiCiTrlG]1
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Available
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University of Tsukuba
|
Category: Marker
Category: Marker
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Ciona intestinalis:
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Tg[MiCiAKRK]1
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Available
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University of Tsukuba
|
Category: Marker
Category: Marker
Category: Marker
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Ciona intestinalis:
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Tg[MiCiTHK]2
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Available
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University of Tsukuba
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Category: Marker
Category: Marker
Category: Marker
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Ciona intestinalis:
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Tg[MiCiPC2K]2
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Available
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University of Tsukuba
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Category: Marker
| Vector : |
pMiCiPC2K |
| Taxonomy : |
Ciona intestinalis
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| Reference : |
Chacha PP, Horie R, Kusakabe TG, Sasakura Y, Singh M, Horie T, Levine M. (2022) Neuronal identities derived by misexpression of the POU IV sensory determinant in a protovertebrate. Proc Natl Acad Sci U S A 119(4)
Osugi T, Sasakura Y, Satake H. (2020) The ventral peptidergic system of the adult ascidian Ciona robusta (Ciona intestinalis Type A) insights from a transgenic animal model. Sci Rep 10(1) 1892
Sakamoto A, Hozumi A, Shiraishi A, Satake H, Horie T, Sasakura Y. (2022) The TRP channel PKD2 is involved in sensing the mechanical stimulus of adhesion for initiating metamorphosis in the chordate Ciona. Dev Growth Differ 64(7) 395-408
Yokoyama TD, Hotta K, Oka K. (2014) Comprehensive morphological analysis of individual peripheral neuron dendritic arbors in ascidian larvae using the photoconvertible protein Kaede. Dev Dyn 243(10) 1362-73
Osugi T, Sasakura Y, Satake H. (2017) The nervous system of the adult ascidian Ciona intestinalis Type A (Ciona robusta): Insights from transgenic animal models. PLoS One 12(6) e0180227
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Ciona intestinalis:
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Tg[MiCiTnIG]3
|
Available
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University of Tsukuba
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Category: Marker
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Ciona intestinalis:
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Tg[MiCiPC2K]3
|
Available
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University of Tsukuba
|
Category: Marker
| Vector : |
pMiCiPC2K |
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Chacha PP, Horie R, Kusakabe TG, Sasakura Y, Singh M, Horie T, Levine M. (2022) Neuronal identities derived by misexpression of the POU IV sensory determinant in a protovertebrate. Proc Natl Acad Sci U S A 119(4)
Osugi T, Sasakura Y, Satake H. (2020) The ventral peptidergic system of the adult ascidian Ciona robusta (Ciona intestinalis Type A) insights from a transgenic animal model. Sci Rep 10(1) 1892
Sakamoto A, Hozumi A, Shiraishi A, Satake H, Horie T, Sasakura Y. (2022) The TRP channel PKD2 is involved in sensing the mechanical stimulus of adhesion for initiating metamorphosis in the chordate Ciona. Dev Growth Differ 64(7) 395-408
Yokoyama TD, Hotta K, Oka K. (2014) Comprehensive morphological analysis of individual peripheral neuron dendritic arbors in ascidian larvae using the photoconvertible protein Kaede. Dev Dyn 243(10) 1362-73
Sasakura Y, Hozumi A. (2018) Formation of adult organs through metamorphosis in ascidians. Wiley Interdiscip Rev Dev Biol 7(2)
Osugi T, Sasakura Y, Satake H. (2017) The nervous system of the adult ascidian Ciona intestinalis Type A (Ciona robusta): Insights from transgenic animal models. PLoS One 12(6) e0180227
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Ciona intestinalis:
|
pSPeGFP
|
Available
|
University of Tsukuba
|
Category: Construct
|
Ciona intestinalis:
|
pMiDestF
|
Available
|
University of Tsukuba
|
Category: Construct
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Kawada T, Shiraishi A, Matsubara S, Hozumi A, Horie T, Sasakura Y, Satake H. (2021) Vasopressin Promoter Transgenic and Vasopressin Gene-Edited Ascidian, <i>Ciona intestinalis</i> Type A (<i>Ciona robusta</i>): Innervation, Gene Expression Profiles, and Phenotypes. Front Endocrinol (Lausanne) 12 668564
Sasakura Y, Suzuki MM, Hozumi A, Inaba K, Satoh N. (2010) Maternal factor-mediated epigenetic gene silencing in the ascidian Ciona intestinalis. Mol Genet Genomics 283(1) 99-110
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Ciona intestinalis:
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pMiEV
|
Available
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University of Tsukuba
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Category: Construct
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Ciona intestinalis:
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pMiCiEf1aFG
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Available
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University of Tsukuba
|
Category: Construct
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Ciona intestinalis:
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pMiCiCesAG
|
Available
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University of Tsukuba
|
Category: Construct
Category: Construct
Category: Construct
Category: Construct
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Ciona intestinalis:
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pSPCiTrlG
|
Available
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University of Tsukuba
|
Category: Construct
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Ciona intestinalis:
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pMiCiTrlG
|
Available
|
University of Tsukuba
|
Category: Construct
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Ciona intestinalis:
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pHTBeGFP
|
Available
|
University of Tsukuba
|
Category: Construct
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Ciona intestinalis:
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pSP-Kaede
|
Available
|
University of Tsukuba
|
Category: Construct
| Taxonomy : |
Ciona intestinalis
|
| Reference : |
Cao C, Lemaire LA, Wang W, Yoon PH, Choi YA, Parsons LR, Matese JC, Wang W, Levine M, Chen K. (2019) Comprehensive single-cell transcriptome lineages of a proto-vertebrate. Nature 571(7765) 349-354
Sakamoto A, Hozumi A, Shiraishi A, Satake H, Horie T, Sasakura Y. (2022) The TRP channel PKD2 is involved in sensing the mechanical stimulus of adhesion for initiating metamorphosis in the chordate Ciona. Dev Growth Differ 64(7) 395-408
Horie T, Horie R, Chen K, Cao C, Nakagawa M, Kusakabe TG, Satoh N, Sasakura Y, Levine M. (2018) Regulatory cocktail for dopaminergic neurons in a protovertebrate identified by whole-embryo single-cell transcriptomics. Genes Dev 32(19-20) 1297-1302
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Ciona intestinalis:
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pSPCiVGLUTK
|
Available
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University of Tsukuba
|
Category: Construct
Category: Construct
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Ciona intestinalis:
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pRN3CiHox1
|
Available
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University of Tsukuba
|
Category: Construct
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Ciona intestinalis:
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pSPeCFP-ter
|
Available
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University of Tsukuba
|
Category: Construct
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Ciona intestinalis:
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pSPeCFPCiHox1
|
Available
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University of Tsukuba
|
Category: Construct
Category: Construct
Category: Construct
Category: Construct
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