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Reference Related Resource Count : 22,040

Associated Resources List

611 items
Strain   611 items Go to list of Strain
DNA   0 items
Organism strain
Rice Wild 580 Go to list
Landrace, Wild Strains 12 Go to list
Mutant lines(KYUSHU Collection) 6 Go to list
Recombination self-fertilizing lines 2 Go to list
Associate Isogenic Marker lines 4 Go to list
Marker gene testers 2 Go to list
Chromosomal partial replacement lines 5 Go to list
Organism DNA
Associated Resource is not found.
Strain List 611 items 1 - 20 / 611
Rice: W0019  Available National Institute of GENETICS
Category: Wild
Rice: W0048  Available National Institute of GENETICS
Category: Wild
Rice: W0107  Available National Institute of GENETICS
Category: Wild
Core collection rank : 3
Species : O. rufipogon
Genome : AA
Taxonomy Id : Oryza
Reference : Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B. (2012) A map of rice genome variation reveals the origin of cultivated rice. Nature 490(7421) 497-501
Takata M, Kishima Y, Sano Y. (2005) DNA Methylation Polymorphisms in Rice and Wild Rice Strains: Detection of Epigenetic Markers Breed Sci. 55 57-63
Takagi K, Nagano H, Kishima Y, Sano Y (2003) MITE-transposon Display Efficiently Detects Polymorphisms among the Oryza AA-genome Species Breed Sci. 53 125-132
Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M. (2011) Artificial selection for a green revolution gene during japonica rice domestication. Proc. Natl. Acad. Sci. U.S.A. 108(27) 11034-9
Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, Matsumoto T. (2009) Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure. Plant J. 60(5) 805-19
Chung MC, Lee YI, Cheng YY, Chou YJ, Lu CF. (2008) Chromosomal polymorphism of ribosomal genes in the genus Oryza. Theor. Appl. Genet. 116(6) 745-53
Kobayashi S, Noro Y, Nagano H, Yoshida KT, Takano-Shimizu T, Kishima Y, Sano Y. (2005) Evidence for an evolutionary force that prevents epigenetic silencing between tail-to-tail rice genes with a short spacer. Gene 346 231-40
Xu JH, Osawa I, Tsuchimoto S, Ohtsubo E, Ohtsubo H. (2005) Two new SINE elements, p-SINE2 and p-SINE3, from rice. Genes Genet. Syst. 80(3) 161-71
Teranishi C, Yoshida K, Miyashita NT. (2008) DNA polymorphism in the supERWOMAN1 (SPW1) locus of the wild rice Oryza rufipogon and its related species. Genes Genet. Syst. 83(5) 403-15
Cheng C, Tsuchimoto S, Ohtsubo H, Ohtsubo E. (2002) Evolutionary relationships among rice species with AA genome based on SINE insertion analysis. Genes Genet. Syst. 77(5) 323-34
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R. (2015) Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza. Genes Genet. Syst. 90(5) 269-81
Nagano H, Onishi K, Ogasawara M, Horiuchi Y, Sano Y. (2005) Genealogy of the "Green Revolution" gene in rice. Genes Genet. Syst. 80(5) 351-6
Rice: W0610  Available National Institute of GENETICS
Category: Wild
Core collection rank : 3
Species : O. rufipogon
Genome : AA
Taxonomy Id : Oryza
Reference : Huang X, Kurata N, Wei X, Wang ZX, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B. (2012) A map of rice genome variation reveals the origin of cultivated rice. Nature 490(7421) 497-501
Yamaki S, Miyabayashi T, Eiguchi M, Kitano H, Nonomura K.I., Kurata N. (2010) Diversity of panicle branching patterns in wild relatives of rice. Breed Sci. 60(5) 586-596
Kubo T, Takashi T, Ashikari M, Yoshimura A, Kurata N. (2016) Two Tightly Linked Genes at the hsa1 Locus Cause Both F1 and F2 Hybrid Sterility in Rice. Mol Plant 9(2) 221-232
Asano K, Yamasaki M, Takuno S, Miura K, Katagiri S, Ito T, Doi K, Wu J, Ebana K, Matsumoto T, Innan H, Kitano H, Ashikari M, Matsuoka M. (2011) Artificial selection for a green revolution gene during japonica rice domestication. Proc. Natl. Acad. Sci. U.S.A. 108(27) 11034-9
Sugimoto K, Takeuchi Y, Ebana K, Miyao A, Hirochika H, Hara N, Ishiyama K, Kobayashi M, Ban Y, Hattori T, Yano M. (2010) Molecular cloning of Sdr4, a regulator involved in seed dormancy and domestication of rice. Proc. Natl. Acad. Sci. U.S.A. 107(13) 5792-7
Mizuta Y, Harushima Y, Kurata N. (2010) Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes. Proc. Natl. Acad. Sci. U.S.A. 107(47) 20417-22
Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, Kanamori H, Namiki N, Mizuno H, Ma J, Sasaki T, Matsumoto T. (2009) Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure. Plant J. 60(5) 805-19
Xu JH, Osawa I, Tsuchimoto S, Ohtsubo E, Ohtsubo H. (2005) Two new SINE elements, p-SINE2 and p-SINE3, from rice. Genes Genet. Syst. 80(3) 161-71
Yin H, Akimoto M, Kaewcheenchai R, Sotowa M, Ishii T, Ishikawa R. (2015) Inconsistent diversities between nuclear and plastid genomes of AA genome species in the genus Oryza. Genes Genet. Syst. 90(5) 269-81
Xu JH, Cheng C, Tsuchimoto S, Ohtsubo H, Ohtsubo E. (2007) Phylogenetic analysis of Oryza rufipogon strains and their relations to Oryza sativa strains by insertion polymorphism of rice SINEs. Genes Genet. Syst. 82(3) 217-29
Rice: W1296  Available National Institute of GENETICS
Category: Wild
Rice: W1542  Available National Institute of GENETICS
Category: Wild
Rice: W1549  Available National Institute of GENETICS
Category: Wild
Rice: W1716  Available National Institute of GENETICS
Category: Wild
Rice: W1718  Available National Institute of GENETICS
Category: Wild
Rice: W1719  Available National Institute of GENETICS
Category: Wild
Rice: W0022  Available National Institute of GENETICS
Category: Wild
Rice: W1560  Available National Institute of GENETICS
Category: Wild
Rice: W1721  Available National Institute of GENETICS
Category: Wild
Rice: W1723  Available National Institute of GENETICS
Category: Wild
Rice: W1724  Available National Institute of GENETICS
Category: Wild
Rice: W2099  Available National Institute of GENETICS
Category: Wild
Rice: W2025  Available National Institute of GENETICS
Category: Wild
Rice: W2036  Available National Institute of GENETICS
Category: Wild
Rice: W2055  Available National Institute of GENETICS
Category: Wild
Rice: W0012  Available National Institute of GENETICS
Category: Wild
DNA List 0 items
Associated Resource is not found.