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Reference Related Resource Count : 22,040

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16 items
Strain   5 items Go to list of Strain
DNA   11 items Go to list of DNA
Organism strain
Lotus Wild accession 1 Go to list
Experimental strains 3 Go to list
Mesorhizobium loti STM mutant 1 Go to list
Organism DNA
Lotus cDNA clones 8 Go to list
Vector 2 Go to list
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Strain List 5 items 1 - 5 / 5
Lotus: MG-113 Miyazaki University
Category: Wild accession
Lotus: Gifu B-129  Available Miyazaki University
Category: Experimental strains
Taxonomy : Lotus japonicus
Reference : Satoru Kunihiro, Daigo Tanabe, Yuiko Niwa, Keisuke Kitamura, Jun Abe, and Tetsuya Yamada (2017) Isolation and molecular characterization of a Lotus japonicus R2R3-MYB subgroup 7 transcription factor gene Plant Biotechnology 34(1) 45-49
Terry Mun, Anna Malolepszy, Niels Sandal, Jens Stougaard, and Stig U. Andersen (2017) User guide for the LORE1 insertion mutant resource. In: Busch W. (eds) Plant Genomics Methods in Molecular Biology 1610 13-23
Makiko Mimura (2013) Genetic and phenotypic variation in Lotus japonicus (Regel) K. Larsen, a model legume species Canadian Journal of Plant Science Vol. 93, No. 3 435-444
Masahiro Okada, Sungwook Park, Takahiro Koshizawa and Minoru Ueda. (2009) (R)-Eucomic acid, a leaf-opening factor of the model organism, Lotus japonicus. Tetrahedron 65 2136-2141
Masatsugu Hashiguchi, Shin-ichi Tsuruta, Ryo Akashi (2011) Morphological Traits of Lotus japonicus (Regal) Ecotypes Collected in Japan IBC 3(4) 1-7
Hideki Hirakawa, Terry Mun, Shusei Sato, Stig U. Andersen (2014) Legume and Lotus japonicus Databases The Lotus japonicus Genome IV 259-267
Hidenori Tanaka, Awatsaya Chotekajorn, Sayumi Kai, Genki Ishigaki, Masatsugu Hashiguchi, Ryo Akashi (2016) Determination of Genome Size, Chromosome Number, and Genetic Variation Using Inter-Simple Sequence Repeat Markers in Lotus spp. Cytologia 81(1) 95-102
S. Okazaki, S. Okabe, M. Higashi, Y. Shimoda, S. Sato, S. Tabata, M. Hashiguchi, R. Akashi and K. Saeki. (2009) Identification and functional analysis of type III effector proteins in Mesorhizobium loti. Molecular Plant-Microbe Interaction
Imaizumi R, Sato S, Kameya N, Nakamura I, Nakamura Y, Tabata S, Ayabe S, Aoki T. (2005) Activation tagging approach in a model legume, Lotus japonicus. J. Plant Res. 118(6) 391-9
Sugimura Y, Saito K. (2017) Transcriptional profiling of arbuscular mycorrhizal roots exposed to high levels of phosphate reveals the repression of cell cycle-related genes and secreted protein genes in Rhizophagus irregularis. Mycorrhiza 27(2) 139-146
Ampomah OY, Jensen JB. (2014) The trehalose utilization gene thuA ortholog in Mesorhizobium loti does not influence competitiveness for nodulation on Lotus spp. World J. Microbiol. Biotechnol. 30(3) 1129-34
Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Nishimura R, Hayashi M, Wu GJ, Kouchi H, Imaizumi-Anraku H, Murakami Y, Kawasaki S, Akao S, Ohmori M, Nagasawa M, Harada K, Kawaguchi M. (2002) HAR1 mediates systemic regulation of symbiotic organ development. Nature 420(6914) 426-9
Imaizumi-Anraku H, Takeda N, Charpentier M, Perry J, Miwa H, Umehara Y, Kouchi H, Murakami Y, Mulder L, Vickers K, Pike J, Downie JA, Wang T, Sato S, Asamizu E, Tabata S, Yoshikawa M, Murooka Y, Wu GJ, Kawaguchi M, Kawasaki S, Parniske M, Hayashi M. (2005) Plastid proteins crucial for symbiotic fungal and bacterial entry into plant roots. Nature 433(7025) 527-31
Udvardi MK, Tabata S, Parniske M, Stougaard J. (2005) Lotus japonicus: legume research in the fast lane. Trends Plant Sci. 10(5) 222-8
Kai S, Tanaka H, Hashiguchi M, Iwata H, Akashi R (2010) Analysis of genetic diversity and morphological traits of Japanese Lotus japonicus for establishment of a core collection Breed Sci. 60(4) 436-446
Feng X, Zhao Z, Tian Z, Xu S, Luo Y, Cai Z, Wang Y, Yang J, Wang Z, Weng L, Chen J, Zheng L, Guo X, Luo J, Sato S, Tabata S, Ma W, Cao X, Hu X, Sun C, Luo D. (2006) Control of petal shape and floral zygomorphy in Lotus japonicus. Proc. Natl. Acad. Sci. U.S.A. 103(13) 4970-5
Bunsupa S, Katayama K, Ikeura E, Oikawa A, Toyooka K, Saito K, Yamazaki M. (2012) Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in leguminosae. Plant Cell 24(3) 1202-16
Sugiyama A, Linley PJ, Sasaki K, Kumano T, Yamamoto H, Shitan N, Ohara K, Takanashi K, Harada E, Hasegawa H, Terakawa T, Kuzuyama T, Yazaki K. (2011) Metabolic engineering for the production of prenylated polyphenols in transgenic legume plants using bacterial and plant prenyltransferases. Metab. Eng. 13(6) 629-37
Gossmann JA, Markmann K, Brachmann A, Rose LE, Parniske M. (2012) Polymorphic infection and organogenesis patterns induced by a Rhizobium leguminosarum isolate from Lotus root nodules are determined by the host genotype. New Phytol. 196(2) 561-573
Maekawa-Yoshikawa M, Müller J, Takeda N, Maekawa T, Sato S, Tabata S, Perry J, Wang TL, Groth M, Brachmann A, Parniske M. (2009) The temperature-sensitive brush mutant of the legume Lotus japonicus reveals a link between root development and nodule infection by rhizobia. Plant Physiol. 149(4) 1785-96
Asamizu E, Shimoda Y, Kouchi H, Tabata S, Sato S. (2008) A positive regulatory role for LjERF1 in the nodulation process is revealed by systematic analysis of nodule-associated transcription factors of Lotus japonicus. Plant Physiol. 147(4) 2030-40
Madsen LH, Fukai E, Radutoiu S, Yost CK, Sandal N, Schauser L, Stougaard J. (2005) LORE1, an active low-copy-number TY3-gypsy retrotransposon family in the model legume Lotus japonicus. Plant J. 44(3) 372-81
Fukudome M, Calvo-Begueria L, Kado T, Osuki K, Rubio MC, Murakami E, Nagata M, Kucho K, Sandal N, Stougaard J, Becana M, Uchiumi T. (2016) Hemoglobin LjGlb1-1 is involved in nodulation and regulates the level of nitric oxide in the Lotus japonicus-Mesorhizobium loti symbiosis. J. Exp. Bot. 67(17) 5275-83
Unno Y, Okubo K, Wasaki J, Shinano T, Osaki M. (2005) Plant growth promotion abilities and microscale bacterial dynamics in the rhizosphere of Lupin analysed by phytate utilization ability. Environ. Microbiol. 7(3) 396-404
Wang X, Sato S, Tabata S, Kawasaki S. (2008) A high-density linkage map of Lotus japonicus based on AFLP and SSR markers. DNA Res. 15(5) 323-32
Maruya J, Saeki K. (2010) The bacA gene homolog, mlr7400, in Mesorhizobium loti MAFF303099 is dispensable for symbiosis with Lotus japonicus but partially capable of supporting the symbiotic function of bacA in Sinorhizobium meliloti. Plant Cell Physiol. 51(9) 1443-52
Tsuno Y, Fujimatsu T, Endo K, Sugiyama A, Yazaki K. (2018) Soyasaponins: A New Class of Root Exudates in Soybean (Glycine max). Plant Cell Physiol. 59(2) 366-375
Handa Y, Nishide H, Takeda N, Suzuki Y, Kawaguchi M, Saito K. (2015) RNA-seq Transcriptional Profiling of an Arbuscular Mycorrhiza Provides Insights into Regulated and Coordinated Gene Expression in Lotus japonicus and Rhizophagus irregularis. Plant Cell Physiol. 56(8) 1490-511
Kojima T, Saito K, Oba H, Yoshida Y, Terasawa J, Umehara Y, Suganuma N, Kawaguchi M, Ohtomo R. (2014) Isolation and phenotypic characterization of Lotus japonicus mutants specifically defective in arbuscular mycorrhizal formation. Plant Cell Physiol. 55(5) 928-41
Ono N, Ishida K, Yamashino T, Nakanishi H, Sato S, Tabata S, Mizuno T. (2010) Genomewide characterization of the light-responsive and clock-controlled output pathways in Lotus japonicus with special emphasis of its uniqueness. Plant Cell Physiol. 51(10) 1800-14
Asamizu E, Nakamura Y, Sato S, Tabata S. (2004) Characteristics of the Lotus japonicus gene repertoire deduced from large-scale expressed sequence tag (EST) analysis. Plant Mol. Biol. 54(3) 405-14
Fukai E, Dobrowolska AD, Madsen LH, Madsen EB, Umehara Y, Kouchi H, Hirochika H, Stougaard J. (2008) Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus. Plant Mol. Biol. 68(6) 653-63
Kawaguchi M, Imaizumi-Anraku H, Koiwa H, Niwa S, Ikuta A, Syono K, Akao S. (2002) Root, root hair, and symbiotic mutants of the model legume Lotus japonicus. Mol. Plant Microbe Interact. 15(1) 17-26
Sandal N, Petersen TR, Murray J, Umehara Y, Karas B, Yano K, Kumagai H, Yoshikawa M, Saito K, Hayashi M, Murakami Y, Wang X, Hakoyama T, Imaizumi-Anraku H, Sato S, Kato T, Chen W, Hossain MS, Shibata S, Wang TL, Yokota K, Larsen K, Kanamori N, Madsen E, Radutoiu S, Madsen LH, Radu TG, Krusell L, Ooki Y, Banba M, Betti M, Rispail N, Skøt L, Tuck E, Perry J, Yoshida S, Vickers K, Pike J, Mulder L, Charpentier M, Müller J, Ohtomo R, Kojima T, Ando S, Marquez AJ, Gresshoff PM, Harada K, Webb J, Hata S, Suganuma N, Kouchi H, Kawasaki S, Tabata S, Hayashi M, Parniske M, Szczyglowski K, Kawaguchi M, Stougaard J. (2006) Genetics of symbiosis in Lotus japonicus: recombinant inbred lines, comparative genetic maps, and map position of 35 symbiotic loci. Mol. Plant Microbe Interact. 19(1) 80-91
Günther C, Schlereth A, Udvardi M, Ott T. (2007) Metabolism of reactive oxygen species is attenuated in leghemoglobin-deficient nodules of Lotus japonicus. Mol. Plant Microbe Interact. 20(12) 1596-603
Holligan D, Zhang X, Jiang N, Pritham EJ, Wessler SR. (2006) The transposable element landscape of the model legume Lotus japonicus. Genetics 174(4) 2215-28
Hanyu M, Fujimoto H, Tejima K, Saeki K. (2009) Functional differences of two distinct catalases in Mesorhizobium loti MAFF303099 under free-living and symbiotic conditions. J. Bacteriol. 191(5) 1463-71
Hakoyama T, Watanabe H, Tomita J, Yamamoto A, Sato S, Mori Y, Kouchi H, Suganuma N. (2009) Nicotianamine synthase specifically expressed in root nodules of Lotus japonicus. Planta 230(2) 309-17
Kai K, Wakasa K, Miyagawa H. (2007) Metabolism of indole-3-acetic acid in rice: identification and characterization of N-beta-D-glucopyranosyl indole-3-acetic acid and its conjugates. Phytochemistry 68(20) 2512-22
Saito S, Motawia MS, Olsen CE, Møller BL, Bak S. (2012) Biosynthesis of rhodiocyanosides in Lotus japonicus: rhodiocyanoside A is synthesized from (Z)-2-methylbutanaloxime via 2-methyl-2-butenenitrile. Phytochemistry 77 260-7
Borjigin N, Furukawa K, Shimoda Y, Tabata S, Sato S, Eda S, Minamisawa K, Mitsui H. (2011) Identification of Mesorhizobium loti genes relevant to symbiosis by using signature-tagged mutants. Microbes Environ. 26(2) 165-71
Amin AN, Hayashi S, Bartlem DG. (2014) Robust in vitro assay system for quantitative analysis of parasitic root-knot nematode infestation using Lotus japonicus. J. Biosci. Bioeng. 118(2) 205-13
Shohei Kusakabe, Nahoko Higasitani, Takakazu Kaneko, Michiko Yasuda, Hiroki Miwa, Shin Okazaki, Kazuhiko Saeki, Atsushi Higashitani, Shusei Sato () Lotus Accessions Possess Multiple Checkpoints Triggered by Different Type III Secretion System Effectors of the Wide-Host-Range Symbiont Bradyrhizobium elkanii USDA61 Microbes and Environments 35
Lotus: Miyakojima MG-20  Available Miyazaki University
Category: Experimental strains
Taxonomy : Lotus japonicus
Reference : Masatsugu Hashiguchi; Rinda Puspasari; Yuya Suematsu; Melody Muguerza; Hidenori Tanaka; Akihiro Suzuki; Franz Hoffmann; Ryo Akashi (2017) Induction of tetraploid Lotus japonicus and interspecific hybridization with super-root derived Lotus corniculatus regenerants Crop Sci 57 2387–2394
Yusaku Sugimura and Katsuharu Saito (2017) Comparative transcriptome analysis between Solanum lycopersicum L. and Lotus japonicus L. during arbuscular mycorrhizal development Soil Science and Plant Nutrition 63(2) 127-136
Quazi Forhad Quadira, Toshihiro Watanabeb, Zheng Chena, Mitsuru Osakib, Takuro Shinanoc (2011) Ionomic response of Lotus japonicus to different root-zone temperatures Soil Science and Plant Nutrition 57(2) 221-232
Katsuyuki Yanagi , Koichi Sugimoto & Kenji Matsui (2011) Oxylipin-specific cytochrome P450s (CYP74s) in Lotus japonicus: their implications in response to mechanical wounding and nodule formation J Plant Interactions Volume 6, Issue 4 255-264
Ying Cheng, Keiko Ishimoto, Yuko Kuriyama, Mitsuru Osaki, Tatsuhiro Ezawa (2012) Ninety-year-, but not single, application of phosphorus fertilizer has a major impact on arbuscular mycorrhizal fungal communities Plant Soil Volume 365, Issue 1-2 397-407
Makiko Mimura (2013) Genetic and phenotypic variation in Lotus japonicus (Regel) K. Larsen, a model legume species Canadian Journal of Plant Science Vol. 93, No. 3 435-444
Xiaoyu Li, Ying Cheng, Wei Ma, Yang Zhao, Haiyang Jiang, Ming Zhang (2010) Identification and characterization of NBS-encoding disease resistance genes in Lotus japonicus Plant Syst Evol Volume 289, Issue 1-2 101-110
Masatsugu Hashiguchi, Shin-ichi Tsuruta, Ryo Akashi (2011) Morphological Traits of Lotus japonicus (Regal) Ecotypes Collected in Japan IBC 3(4) 1-7
Hideki Hirakawa, Terry Mun, Shusei Sato, Stig U. Andersen (2014) Legume and Lotus japonicus Databases The Lotus japonicus Genome IV 259-267
Hidenori Tanaka, Awatsaya Chotekajorn, Sayumi Kai, Genki Ishigaki, Masatsugu Hashiguchi, Ryo Akashi (2016) Determination of Genome Size, Chromosome Number, and Genetic Variation Using Inter-Simple Sequence Repeat Markers in Lotus spp. Cytologia 81(1) 95-102
S. Okazaki, S. Okabe, M. Higashi, Y. Shimoda, S. Sato, S. Tabata, M. Hashiguchi, R. Akashi and K. Saeki. (2009) Identification and functional analysis of type III effector proteins in Mesorhizobium loti. Molecular Plant-Microbe Interaction
Hijikata N, Murase M, Tani C, Ohtomo R, Osaki M, Ezawa T. (2010) Polyphosphate has a central role in the rapid and massive accumulation of phosphorus in extraradical mycelium of an arbuscular mycorrhizal fungus. New Phytol. 186(2) 285-9
Osuki KI, Hashimoto S, Suzuki A, Araragi M, Takahara A, Kurosawa M, Kucho KI, Higashi S, Abe M, Uchiumi T. (2016) Gene expression and localization of a β-1,3-glucanase of Lotus japonicus. J. Plant Res. 129(4) 749-758
Nishimura R, Hayashi M, Wu GJ, Kouchi H, Imaizumi-Anraku H, Murakami Y, Kawasaki S, Akao S, Ohmori M, Nagasawa M, Harada K, Kawaguchi M. (2002) HAR1 mediates systemic regulation of symbiotic organ development. Nature 420(6914) 426-9
Imaizumi-Anraku H, Takeda N, Charpentier M, Perry J, Miwa H, Umehara Y, Kouchi H, Murakami Y, Mulder L, Vickers K, Pike J, Downie JA, Wang T, Sato S, Asamizu E, Tabata S, Yoshikawa M, Murooka Y, Wu GJ, Kawaguchi M, Kawasaki S, Parniske M, Hayashi M. (2005) Plastid proteins crucial for symbiotic fungal and bacterial entry into plant roots. Nature 433(7025) 527-31
Van de Velde W, Zehirov G, Szatmari A, Debreczeny M, Ishihara H, Kevei Z, Farkas A, Mikulass K, Nagy A, Tiricz H, Satiat-Jeunemaître B, Alunni B, Bourge M, Kucho K, Abe M, Kereszt A, Maroti G, Uchiumi T, Kondorosi E, Mergaert P. (2010) Plant peptides govern terminal differentiation of bacteria in symbiosis. Science 327(5969) 1122-6
Udvardi MK, Tabata S, Parniske M, Stougaard J. (2005) Lotus japonicus: legume research in the fast lane. Trends Plant Sci. 10(5) 222-8
Kai S, Tanaka H, Hashiguchi M, Iwata H, Akashi R (2010) Analysis of genetic diversity and morphological traits of Japanese Lotus japonicus for establishment of a core collection Breed Sci. 60(4) 436-446
Feng X, Zhao Z, Tian Z, Xu S, Luo Y, Cai Z, Wang Y, Yang J, Wang Z, Weng L, Chen J, Zheng L, Guo X, Luo J, Sato S, Tabata S, Ma W, Cao X, Hu X, Sun C, Luo D. (2006) Control of petal shape and floral zygomorphy in Lotus japonicus. Proc. Natl. Acad. Sci. U.S.A. 103(13) 4970-5
Takos A, Lai D, Mikkelsen L, Abou Hachem M, Shelton D, Motawia MS, Olsen CE, Wang TL, Martin C, Rook F. (2010) Genetic screening identifies cyanogenesis-deficient mutants of Lotus japonicus and reveals enzymatic specificity in hydroxynitrile glucoside metabolism. Plant Cell 22(5) 1605-19
Sugiyama A, Linley PJ, Sasaki K, Kumano T, Yamamoto H, Shitan N, Ohara K, Takanashi K, Harada E, Hasegawa H, Terakawa T, Kuzuyama T, Yazaki K. (2011) Metabolic engineering for the production of prenylated polyphenols in transgenic legume plants using bacterial and plant prenyltransferases. Metab. Eng. 13(6) 629-37
Kikuchi Y, Hijikata N, Yokoyama K, Ohtomo R, Handa Y, Kawaguchi M, Saito K, Ezawa T. (2014) Polyphosphate accumulation is driven by transcriptome alterations that lead to near-synchronous and near-equivalent uptake of inorganic cations in an arbuscular mycorrhizal fungus. New Phytol. 204(3) 638-49
Gossmann JA, Markmann K, Brachmann A, Rose LE, Parniske M. (2012) Polymorphic infection and organogenesis patterns induced by a Rhizobium leguminosarum isolate from Lotus root nodules are determined by the host genotype. New Phytol. 196(2) 561-573
Tominaga A, Nagata M, Futsuki K, Abe H, Uchiumi T, Abe M, Kucho K, Hashiguchi M, Akashi R, Hirsch AM, Arima S, Suzuki A. (2009) Enhanced nodulation and nitrogen fixation in the abscisic acid low-sensitive mutant enhanced nitrogen fixation1 of Lotus japonicus. Plant Physiol. 151(4) 1965-76
Maekawa-Yoshikawa M, Müller J, Takeda N, Maekawa T, Sato S, Tabata S, Perry J, Wang TL, Groth M, Brachmann A, Parniske M. (2009) The temperature-sensitive brush mutant of the legume Lotus japonicus reveals a link between root development and nodule infection by rhizobia. Plant Physiol. 149(4) 1785-96
Hiraoka Y, Ueda H, Sugimoto Y. (2009) Molecular responses of Lotus japonicus to parasitism by the compatible species Orobanche aegyptiaca and the incompatible species Striga hermonthica. J. Exp. Bot. 60(2) 641-50
Ichida H, Matsuyama T, Abe T, Koba T. (2007) DNA adenine methylation changes dramatically during establishment of symbiosis. FEBS J. 274(4) 951-62
Nukui N, Minamisawa K, Ayabe S, Aoki T. (2006) Expression of the 1-aminocyclopropane-1-carboxylic acid deaminase gene requires symbiotic nitrogen-fixing regulator gene nifA2 in Mesorhizobium loti MAFF303099. Appl. Environ. Microbiol. 72(7) 4964-9
Wang X, Sato S, Tabata S, Kawasaki S. (2008) A high-density linkage map of Lotus japonicus based on AFLP and SSR markers. DNA Res. 15(5) 323-32
Sugiyama A, Shitan N, Sato S, Nakamura Y, Tabata S, Yazaki K. (2006) Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DNA Res. 13(5) 205-28
Sato S, Nakamura Y, Kaneko T, Asamizu E, Kato T, Nakao M, Sasamoto S, Watanabe A, Ono A, Kawashima K, Fujishiro T, Katoh M, Kohara M, Kishida Y, Minami C, Nakayama S, Nakazaki N, Shimizu Y, Shinpo S, Takahashi C, Wada T, Yamada M, Ohmido N, Hayashi M, Fukui K, Baba T, Nakamichi T, Mori H, Tabata S. (2008) Genome structure of the legume, Lotus japonicus. DNA Res. 15(4) 227-39
Shimada N, Sato S, Akashi T, Nakamura Y, Tabata S, Ayabe S, Aoki T. (2007) Genome-wide analyses of the structural gene families involved in the legume-specific 5-deoxyisoflavonoid biosynthesis of Lotus japonicus. DNA Res. 14(1) 25-36
Nagata M, Yamamoto N, Shigeyama T, Terasawa Y, Anai T, Sakai T, Inada S, Arima S, Hashiguchi M, Akashi R, Nakayama H, Ueno D, Hirsch AM, Suzuki A. (2015) Red/Far Red Light Controls Arbuscular Mycorrhizal Colonization via Jasmonic Acid and Strigolactone Signaling. Plant Cell Physiol. 56(11) 2100-9
Sugiyama A, Saida Y, Yoshimizu M, Takanashi K, Sosso D, Frommer WB, Yazaki K. (2017) Molecular Characterization of LjSWEET3, a Sugar Transporter in Nodules of Lotus japonicus. Plant Cell Physiol. 58(2) 298-306
Takanashi K, Yokosho K, Saeki K, Sugiyama A, Sato S, Tabata S, Ma JF, Yazaki K. (2013) LjMATE1: a citrate transporter responsible for iron supply to the nodule infection zone of Lotus japonicus. Plant Cell Physiol. 54(4) 585-94
Kojima T, Saito K, Oba H, Yoshida Y, Terasawa J, Umehara Y, Suganuma N, Kawaguchi M, Ohtomo R. (2014) Isolation and phenotypic characterization of Lotus japonicus mutants specifically defective in arbuscular mycorrhizal formation. Plant Cell Physiol. 55(5) 928-41
Ono N, Ishida K, Yamashino T, Nakanishi H, Sato S, Tabata S, Mizuno T. (2010) Genomewide characterization of the light-responsive and clock-controlled output pathways in Lotus japonicus with special emphasis of its uniqueness. Plant Cell Physiol. 51(10) 1800-14
Murakami E, Nagata M, Shimoda Y, Kucho K, Higashi S, Abe M, Hashimoto M, Uchiumi T. (2011) Nitric oxide production induced in roots of Lotus japonicus by lipopolysaccharide from Mesorhizobium loti. Plant Cell Physiol. 52(4) 610-7
Asamizu E, Nakamura Y, Sato S, Tabata S. (2004) Characteristics of the Lotus japonicus gene repertoire deduced from large-scale expressed sequence tag (EST) analysis. Plant Mol. Biol. 54(3) 405-14
Lai D, Pičmanová M, Abou Hachem M, Motawia MS, Olsen CE, Møller BL, Rook F, Takos AM. (2015) Lotus japonicus flowers are defended by a cyanogenic β-glucosidase with highly restricted expression to essential reproductive organs. Plant Mol. Biol. 89(1-2) 21-34
Fukai E, Dobrowolska AD, Madsen LH, Madsen EB, Umehara Y, Kouchi H, Hirochika H, Stougaard J. (2008) Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus. Plant Mol. Biol. 68(6) 653-63
Kawaguchi M, Imaizumi-Anraku H, Koiwa H, Niwa S, Ikuta A, Syono K, Akao S. (2002) Root, root hair, and symbiotic mutants of the model legume Lotus japonicus. Mol. Plant Microbe Interact. 15(1) 17-26
Sasakura F, Uchiumi T, Shimoda Y, Suzuki A, Takenouchi K, Higashi S, Abe M. (2006) A class 1 hemoglobin gene from Alnus firma functions in symbiotic and nonsymbiotic tissues to detoxify nitric oxide. Mol. Plant Microbe Interact. 19(4) 441-50
Nakatsukasa-Akune M, Yamashita K, Shimoda Y, Uchiumi T, Abe M, Aoki T, Kamizawa A, Ayabe S, Higashi S, Suzuki A. (2005) Suppression of root nodule formation by artificial expression of the TrEnodDR1 (coat protein of White clover cryptic virus 1) gene in Lotus japonicus. Mol. Plant Microbe Interact. 18(10) 1069-80
Takanashi K, Sasaki T, Kan T, Saida Y, Sugiyama A, Yamamoto Y, Yazaki K. (2016) A Dicarboxylate Transporter, LjALMT4, Mainly Expressed in Nodules of Lotus japonicus. Mol. Plant Microbe Interact. 29(7) 584-92
Sandal N, Petersen TR, Murray J, Umehara Y, Karas B, Yano K, Kumagai H, Yoshikawa M, Saito K, Hayashi M, Murakami Y, Wang X, Hakoyama T, Imaizumi-Anraku H, Sato S, Kato T, Chen W, Hossain MS, Shibata S, Wang TL, Yokota K, Larsen K, Kanamori N, Madsen E, Radutoiu S, Madsen LH, Radu TG, Krusell L, Ooki Y, Banba M, Betti M, Rispail N, Skøt L, Tuck E, Perry J, Yoshida S, Vickers K, Pike J, Mulder L, Charpentier M, Müller J, Ohtomo R, Kojima T, Ando S, Marquez AJ, Gresshoff PM, Harada K, Webb J, Hata S, Suganuma N, Kouchi H, Kawasaki S, Tabata S, Hayashi M, Parniske M, Szczyglowski K, Kawaguchi M, Stougaard J. (2006) Genetics of symbiosis in Lotus japonicus: recombinant inbred lines, comparative genetic maps, and map position of 35 symbiotic loci. Mol. Plant Microbe Interact. 19(1) 80-91
Maekawa T, Kusakabe M, Shimoda Y, Sato S, Tabata S, Murooka Y, Hayashi M. (2008) Polyubiquitin promoter-based binary vectors for overexpression and gene silencing in Lotus japonicus. Mol. Plant Microbe Interact. 21(4) 375-82
Ikeda Y, Shimura H, Kitahara R, Masuta C, Ezawa T. (2012) A novel virus-like double-stranded RNA in an obligate biotroph arbuscular mycorrhizal fungus: a hidden player in mycorrhizal symbiosis. Mol. Plant Microbe Interact. 25(7) 1005-12
Holligan D, Zhang X, Jiang N, Pritham EJ, Wessler SR. (2006) The transposable element landscape of the model legume Lotus japonicus. Genetics 174(4) 2215-28
Nambu M, Tatsukami Y, Morisaka H, Kuroda K, Ueda M. (2015) Quantitative time-course proteome analysis of Mesorhizobium loti during nodule maturation. J Proteomics 125 112-20
Poch HL, López RH, Clark SJ. (2007) Ecotypes of the model legume Lotus japonicus vary in their interaction phenotypes with the root-knot nematode Meloidogyne incognita. Ann. Bot. 99(6) 1223-9
Tatsukami Y, Nambu M, Morisaka H, Kuroda K, Ueda M. (2013) Disclosure of the differences of Mesorhizobium loti under the free-living and symbiotic conditions by comparative proteome analysis without bacteroid isolation. BMC Microbiol. 13 180
Uchiumi T, Ohwada T, Itakura M, Mitsui H, Nukui N, Dawadi P, Kaneko T, Tabata S, Yokoyama T, Tejima K, Saeki K, Omori H, Hayashi M, Maekawa T, Sriprang R, Murooka Y, Tajima S, Simomura K, Nomura M, Suzuki A, Shimoda Y, Sioya K, Abe M, Minamisawa K. (2004) Expression islands clustered on the symbiosis island of the Mesorhizobium loti genome. J. Bacteriol. 186(8) 2439-48
Takanashi K, Sugiyama A, Sato S, Tabata S, Yazaki K. (2012) LjABCB1, an ATP-binding cassette protein specifically induced in uninfected cells of Lotus japonicus nodules. J. Plant Physiol. 169(3) 322-6
Kimura M, Cutler S, Isobe S. (2015) A Novel Phenolic Compound, Chloroxynil, Improves Agrobacterium-Mediated Transient Transformation in Lotus japonicus. PLoS ONE 10(7) e0131626
Sugiyama A, Fukuda S, Takanashi K, Yoshioka M, Yoshioka H, Narusaka Y, Narusaka M, Kojima M, Sakakibara H, Shitan N, Sato S, Tabata S, Kawaguchi M, Yazaki K. (2015) Molecular Characterization of LjABCG1, an ATP-Binding Cassette Protein in Lotus japonicus. PLoS ONE 10(9) e0139127
Ichida H, Yoneyama K, Koba T, Abe T. (2009) Epigenetic modification of rhizobial genome is essential for efficient nodulation. Biochem. Biophys. Res. Commun. 389(2) 301-4
Amin AN, Hayashi S, Bartlem DG. (2014) Robust in vitro assay system for quantitative analysis of parasitic root-knot nematode infestation using Lotus japonicus. J. Biosci. Bioeng. 118(2) 205-13
Shigeyama T, Tominaga A, Arima S, Sakai T, Inada S, Jikumaru Y, Kamiya Y, Uchiumi T, Abe M, Hashiguchi M, Akashi R, Hirsch AM, Suzuki A. (2012) Additional cause for reduced JA-Ile in the root of a Lotus japonicus phyB mutant. Plant Signal Behav 7(7) 746-8
Yamashino T, Yamawaki S, Hagui E, Ishida K, Ueoka-Nakanishi H, Nakamichi N, Mizuno T. (2013) Clock-controlled and FLOWERING LOCUS T (FT)-dependent photoperiodic pathway in Lotus japonicus II: characterization of a microRNA implicated in the control of flowering time. Biosci. Biotechnol. Biochem. 77(6) 1179-85
Ueoka-Nakanishi H, Hori N, Ishida K, Ono N, Yamashino T, Nakamichi N, Mizuno T. (2011) Characterization of shade avoidance responses in Lotus japonicus. Biosci. Biotechnol. Biochem. 75(11) 2148-54
Ueda H, Sugimoto Y. (2010) Vestitol as a chemical barrier against intrusion of parasitic plant Striga hermonthica into Lotus japonicus roots. Biosci. Biotechnol. Biochem. 74(8) 1662-7
Akihiro Suzuki, Hisatoshi Hara, Tomoyo Kinoue, Mikiko Abe, Toshiki Uchiumi, Ken-ichi Kucho, Shiro Higashi, Ann M. Hirsch and Susumu Arima (2008) Split-root study of autoregulation of nodulation in the model legume Lotus japonicus J Plant Res. 121 (2)
Lotus: L. burttii B-303  Available Miyazaki University
Category: Experimental strains
Lotus: 10T05g06  Available Miyazaki University
Category: Mesorhizobium loti STM mutant
DNA List 11 items 1 - 11 / 11
Lotus: MPD075a04  Available Miyazaki University
Category: cDNA clones
library code : MPD
organ : Pod (20-30 mm)
library type : Normalized
vector : pBluescript II SK-
Accession Number : 3' end sequence:AV774891
Taxonomy : Lotus japonicus
Reference : Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Lotus: MWM249g01  Available Miyazaki University
Category: cDNA clones
library code : MWM
organ : Whole plant
library type : Normalized
vector : pBluescript II SK-
Accession Number : 5' end sequence:AV414824
Taxonomy : Lotus japonicus
Reference : Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Lotus: MWM092h09  Available Miyazaki University
Category: cDNA clones
library code : MWM
organ : Whole plant
library type : Normalized
vector : pBluescript II SK-
Accession Number : 5' end sequence:AV428151
Taxonomy : Lotus japonicus
Reference : Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Lotus: MPD004c03  Available Miyazaki University
Category: cDNA clones
Lotus: SPDL089e08  Available Miyazaki University
Category: cDNA clones
library code : SPDL
organ : Pod (<20 mm)
library type : Size-selected
vector : pBluescript II SK-
Accession Number : 3' end sequence:BP057594
Taxonomy : Lotus japonicus
Reference : Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Lotus: MWM058d07  Available Miyazaki University
Category: cDNA clones
library code : MWM
organ : Whole plant
library type : Normalized
vector : pBluescript II SK-
Accession Number : 5' end sequence:AV425730,3' end sequence:AV765614
Taxonomy : Lotus japonicus
Reference : Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Lotus: MR020b12  Available Miyazaki University
Category: cDNA clones
Lotus: MWM134b04  Available Miyazaki University
Category: cDNA clones
library code : MWM
organ : Whole plant
library type : Normalized
vector : pBluescript II SK-
Accession Number : 5' end sequence:AV416849
Taxonomy : Lotus japonicus
Reference : Akashi T, Koshimizu S, Aoki T, Ayabe S. (2006) Identification of cDNAs encoding pterocarpan reductase involved in isoflavan phytoalexin biosynthesis in Lotus japonicus by EST mining. FEBS Lett. 580(24) 5666-70
Lotus: pUB-GWS-GFP  Available Miyazaki University
Category: Vector
Accession Number : AB303066
Feature : pUB-GWS-GFP
detail : http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&id=170172461
Depositor : Makoto Hayashi
Developer : Makoto Hayashi
Amount : 200ng
Taxonomy : Lotus japonicus
Reference : Sugiyama A, Saida Y, Yoshimizu M, Takanashi K, Sosso D, Frommer WB, Yazaki K. (2017) Molecular Characterization of LjSWEET3, a Sugar Transporter in Nodules of Lotus japonicus. Plant Cell Physiol. 58(2) 298-306
Lotus: pUB-GW-GFP  Available Miyazaki University
Category: Vector
Accession Number : AB303064
Feature : pUB-GW-GFP
detail : http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nuccore&id=170172451
Depositor : Makoto Hayashi
Developer : Makoto Hayashi
Amount : 200ng
Taxonomy : Lotus japonicus
Reference : Xie F, Murray JD, Kim J, Heckmann AB, Edwards A, Oldroyd GE, Downie JA. (2012) Legume pectate lyase required for root infection by rhizobia. Proc. Natl. Acad. Sci. U.S.A. 109(2) 633-8
Lotus: LjFL3-013-AG11  Available Miyazaki University
Category: LjFLcDNA clones
organ : MG-20 (shoot or root), B-129 (suspension culture cells treated with or without yeast extract)
library type : Full length enriched
vector : pFLCIII (Sfi I, 4 bp Tag)
Accession Number : 5' end sequence:FS322418
Taxonomy : Lotus japonicus
Reference : Uchida K, Akashi T, Aoki T. (2017) The Missing Link in Leguminous Pterocarpan Biosynthesis is a Dirigent Domain-Containing Protein with Isoflavanol Dehydratase Activity. Plant Cell Physiol. 58(2) 398-408