Tabs(ALL, DNA, BLAST, GO, Taxonomy, DO, Reference) are clickable.
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Reference Related Resource Count :
33,482
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Reference Detail
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| Author |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. |
| Reference |
Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. |
| Journal |
Proc Natl Acad Sci U S A |
| Volume |
117(1) |
| Page |
656-667 |
| Year Published |
2020 |
| Pubmed ID |
31754030
|
Related Resource Count
|
29 items
|
|
|
|
| Organism |
strain |
C. elegans
|
Mutants (Isolated) |
29 |
|
|
| Organism |
DNA |
| Associated Resource is not found. |
|
|
C. elegans:
|
tm238
|
 Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm238 |
| Gene name, cosmid : |
C36F7.1 |
| Gene name, 3-letter : |
irx-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Mills H, Wragg R, Hapiak V, Castelletto M, Zahratka J, Harris G, Summers P, Korchnak A, Law W, Bamber B, Komuniecki R. (2012) Monoamines and neuropeptides interact to inhibit aversive behaviour in Caenorhabditis elegans. EMBO J 31(3) 667-78
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm522
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm522 |
| Gene name, cosmid : |
F13H6.1 |
| Gene name, 3-letter : |
bcl-11 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
|
|
C. elegans:
|
tm556
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm556 |
| Gene name, cosmid : |
F37D6.2 |
| Gene name, 3-letter : |
row-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Nix P, Hammarlund M, Hauth L, Lachnit M, Jorgensen EM, Bastiani M. (2014) Axon regeneration genes identified by RNAi screening in C. elegans. J Neurosci 34(2) 629-45
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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|
C. elegans:
|
tm559
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm559 |
| Gene name, cosmid : |
M03D4.4 |
| Gene name, 3-letter : |
M03D4.4 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
|
|
C. elegans:
|
tm581
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm581 |
| Gene name, cosmid : |
C24H11.3 |
| Gene name, 3-letter : |
tbx-38 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Charest J, Daniele T, Wang J, Bykov A, Mandlbauer A, Asparuhova M, Röhsner J, Gutiérrez-Pérez P, Cochella L. (2020) Combinatorial Action of Temporally Segregated Transcription Factors. Dev Cell 55(4) 483-499.e7
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
|
|
C. elegans:
|
tm683
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm683 |
| Gene name, cosmid : |
C24B5.2 |
| Gene name, 3-letter : |
spas-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Chuang M, Hsiao TI, Tong A, Xu S, Chisholm AD. (2016) DAPK interacts with Patronin and the microtubule cytoskeleton in epidermal development and wound repair. Elife 5
Matsushita-Ishiodori Y, Yamanaka K, Ogura T. (2007) The C. elegans homologue of the spastic paraplegia protein, spastin, disassembles microtubules. Biochem Biophys Res Commun 359(1) 157-62
Liu X, Guo X, Niu L, Li X, Sun F, Hu J, Wang X, Shen K. (2019) Atlastin-1 regulates morphology and function of endoplasmic reticulum in dendrites. Nat Commun 10(1) 568
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
Julien C, Lissouba A, Madabattula S, Fardghassemi Y, Rosenfelt C, Androschuk A, Strautman J, Wong C, Bysice A, O''sullivan J, Rouleau GA, Drapeau P, Parker JA, Bolduc FV. (2016) Conserved pharmacological rescue of hereditary spastic paraplegia-related phenotypes across model organisms. Hum Mol Genet 25(6) 1088-99
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C. elegans:
|
tm748
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm748 |
| Gene name, cosmid : |
ZK899.8 |
| Gene name, 3-letter : |
gap-2 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Stetak A, Gutierrez P, Hajnal A. (2008) Tissue-specific functions of the Caenorhabditis elegans p120 Ras GTPase activating protein GAP-3. Dev Biol 323(2) 166-76
Yang Y, Han SM, Miller MA. (2010) MSP hormonal control of the oocyte MAP kinase cascade and reactive oxygen species signaling. Dev Biol 342(1) 96-107
Rawsthorne H, Calahorro F, Holden-Dye L, O'' Connor V, Dillon J. (2021) Investigating autism associated genes in C. elegans reveals candidates with a role in social behaviour. PLoS One 16(5) e0243121
Clayton JE, van den Heuvel SJ, Saito RM. (2008) Transcriptional control of cell-cycle quiescence during C. elegans development. Dev Biol 313(2) 603-13
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
Gyurkó MD, Csermely P, Sőti C, Steták A. (2015) Distinct roles of the RasGAP family proteins in C. elegans associative learning and memory. Sci Rep 5 15084
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C. elegans:
|
tm846
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm846 |
| Gene name, cosmid : |
C25B8.1 |
| Gene name, 3-letter : |
kqt-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm1072
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm1072 |
| Gene name, cosmid : |
R06C7.3 |
| Gene name, 3-letter : |
dhp-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm1276
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm1276 |
| Gene name, cosmid : |
F02E9.4 |
| Gene name, 3-letter : |
sin-3 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Müthel S, Uyar B, He M, Krause A, Vitrinel B, Bulut S, Vasiljevic D, Marchal I, Kempa S, Akalin A, Tursun B. (2019) The conserved histone chaperone LIN-53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans. Aging Cell 18(6) e13012
Nomoto Y, Kubota Y, Ohnishi Y, Kasahara K, Tomita A, Oshime T, Yamashita H, Fahmi M, Ito M. (2019) Gene Cascade Finder: A tool for identification of gene cascades and its application in Caenorhabditis elegans. PLoS One 14(9) e0215187
Kim H, Ding YH, Zhang G, Yan YH, Conte D Jr, Dong MQ, Mello CC. (2021) HDAC1 SUMOylation promotes Argonaute-directed transcriptional silencing in <i>C. elegans</i>. Elife 10
Choy SW, Wong YM, Ho SH, Chow KL. (2007) C. elegans SIN-3 and its associated HDAC corepressor complex act as mediators of male sensory ray development. Biochem Biophys Res Commun 358(3) 802-7
Lee J, Taylor CA, Barnes KM, Shen A, Stewart EV, Chen A, Xiang YK, Bao Z, Shen K. (2019) A Myt1 family transcription factor defines neuronal fate by repressing non-neuronal genes. Elife 8
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
Pokhrel B, Chen Y, Biro JJ. (2019) CFP-1 interacts with HDAC1/2 complexes in C. elegans development. FEBS J 286(13) 2490-2504
Hajduskova M, Baytek G, Kolundzic E, Gosdschan A, Kazmierczak M, Ofenbauer A, Beato Del Rosal ML, Herzog S, Ul Fatima N, Mertins P, Seelk-Müthel S, Tursun B. (2019) MRG-1/MRG15 Is a Barrier for Germ Cell to Neuron Reprogramming in <i>Caenorhabditis elegans</i>. Genetics 211(1) 121-139
She X, Xu X, Fedotov A, Kelly WG, Maine EM. (2009) Regulation of heterochromatin assembly on unpaired chromosomes during Caenorhabditis elegans meiosis by components of a small RNA-mediated pathway. PLoS Genet 5(8) e1000624
Checchi PM, Engebrecht J. (2011) Caenorhabditis elegans histone methyltransferase MET-2 shields the male X chromosome from checkpoint machinery and mediates meiotic sex chromosome inactivation. PLoS Genet 7(9) e1002267
Zhuang JJ, Banse SA, Hunter CP. (2013) The nuclear argonaute NRDE-3 contributes to transitive RNAi in Caenorhabditis elegans. Genetics 194(1) 117-31
Beurton F, Stempor P, Caron M, Appert A, Dong Y, Chen RA, Cluet D, Couté Y, Herbette M, Huang N, Polveche H, Spichty M, Bedet C, Ahringer J, Palladino F. (2019) Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans. Nucleic Acids Res 47(21) 11164-11180
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C. elegans:
|
tm1803
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm1803 |
| Gene name, cosmid : |
W06H12.1 |
| Gene name, 3-letter : |
ztf-6 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Li Y, Zhao D, Horie T, Chen G, Bao H, Chen S, Liu W, Horie R, Liang T, Dong B, Feng Q, Tao Q, Liu X. (2017) Conserved gene regulatory module specifies lateral neural borders across bilaterians. Proc Natl Acad Sci U S A 114(31) E6352-E6360
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm2107
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm2107 |
| Gene name, cosmid : |
F48B9.5 |
| Gene name, 3-letter : |
npax-2 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm2752
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm2752 |
| Gene name, cosmid : |
F02E8.3 |
| Gene name, 3-letter : |
aps-2 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm3104
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm3104 |
| Gene name, cosmid : |
C29F7.6 |
| Gene name, 3-letter : |
jmjd-3.3 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm3197
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm3197 |
| Gene name, cosmid : |
C29F7.6 |
| Gene name, 3-letter : |
jmjd-3.3 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Guillermo ARR, Chocian K, Gavriilidis G, Vandamme J, Salcini AE, Mellor J, Woollard A. (2021) H3K27 modifiers regulate lifespan in C. elegans in a context-dependent manner. BMC Biol 19(1) 59
Zaghet N, Madsen K, Rossi F, Perez DF, Amendola PG, Demharter S, Pfisterer U, Khodosevich K, Pasini D, Salcini AE. (2021) Coordinated maintenance of H3K36/K27 methylation by histone demethylases preserves germ cell identity and immortality. Cell Rep 37(8) 110050
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
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tm3318
|
Available
|
TWMU
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Category: Mutants (Isolated)
| Allele : |
tm3318 |
| Gene name, cosmid : |
Y47G6A.6 |
| Gene name, 3-letter : |
pcaf-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
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tm3577
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm3577 |
| Gene name, cosmid : |
ZC482.1 |
| Gene name, 3-letter : |
gab-1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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C. elegans:
|
tm3968
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm3968 |
| Gene name, cosmid : |
C44E4.1 |
| Gene name, 3-letter : |
C44E4.1 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
Rinschen MM, Bharill P, Wu X, Kohli P, Reinert MJ, Kretz O, Saez I, Schermer B, Höhne M, Bartram MP, Aravamudhan S, Brooks BR, Vilchez D, Huber TB, Müller RU, Krüger M, Benzing T. (2016) The ubiquitin ligase Ubr4 controls stability of podocin/MEC-2 supercomplexes. Hum Mol Genet 25(7) 1328-44
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C. elegans:
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tm4671
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm4671 |
| Gene name, cosmid : |
C18H9.3 |
| Gene name, 3-letter : |
C18H9.3 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
|
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C. elegans:
|
tm5409
|
Available
|
TWMU
|
Category: Mutants (Isolated)
| Allele : |
tm5409 |
| Gene name, cosmid : |
F46B6.3 |
| Gene name, 3-letter : |
smg-4 |
| Taxonomy : |
Caenorhabditis elegans
|
| Reference : |
Sakaki K, Yoshina S, Shen X, Han J, DeSantis MR, Xiong M, Mitani S, Kaufman RJ. (2012) RNA surveillance is required for endoplasmic reticulum homeostasis. Proc Natl Acad Sci U S A 109(21) 8079-84
McDiarmid TA, Belmadani M, Liang J, Meili F, Mathews EA, Mullen GP, Hendi A, Wong WR, Rand JB, Mizumoto K, Haas K, Pavlidis P, Rankin CH. (2020) Systematic phenomics analysis of autism-associated genes reveals parallel networks underlying reversible impairments in habituation. Proc Natl Acad Sci U S A 117(1) 656-667
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